Analysis of interatomic Contacts of Structural Units in PDB entry:
2AEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AEG entry

There are 3 chains in PDB entry 2AEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 2VAL 244
B
 CYS 2VAL 244
C
 CYS 2VAL 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 2AEG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 17Right-handed alpha
Helix 2
2
A
61 78Right-handed alpha
Helix 3
3
A
84 92Right-handed alpha
Helix 4
4
A
105 112Right-handed 310
Helix 5
5
A
113 115Right-handed 310
Helix 6
6
A
168 172Right-handed 310
Helix 7
7
A
204 214Right-handed alpha
Helix 8
8
A
215 220Right-handed alpha
Helix 9
9
A
221 223Right-handed 310
Helix 10
10
B
12 17Right-handed alpha
Helix 11
11
B
63 78Right-handed alpha
Helix 12
12
B
84 92Right-handed alpha
Helix 13
13
B
105 110Right-handed alpha
Helix 14
14
B
111 112Right-handed 310
Helix 15
15
B
113 115Right-handed 310
Helix 16
16
B
130 133Right-handed 310
Helix 17
17
B
204 212Right-handed alpha
Helix 18
18
B
215 220Right-handed alpha
Helix 19
19
B
221 223Right-handed 310
Helix 20
20
B
227 231Right-handed 310
Helix 21
21
C
12 17Right-handed alpha
Helix 22
22
C
61 79Right-handed alpha
Helix 23
23
C
84 92Right-handed alpha
Helix 24
24
C
108 112Right-handed 310
Helix 25
25
C
113 115Right-handed 310
Helix 26
26
C
130 133Right-handed 310
Helix 27
27
C
204 214Right-handed alpha
Helix 28
28
C
215 220Right-handed alpha
Helix 29
29
C
221 223Right-handed 310
Helix 30
30
C
227 231Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 2AEG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
5 7anti-parallel
Strand 3
A
124 128anti-parallel
Strand 4
A
141 145anti-parallel
Strand 5
A
232 237anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
49 56parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
117 122anti-parallel
Strand 5
A
153 165anti-parallel
Strand 6
A
174 184anti-parallel
Strand 7
A
198 199anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
174 184parallel
Strand 3
A
49 56parallel
Strand 4
A
37 43anti-parallel
Strand 5
A
117 122anti-parallel
Strand 6
A
153 165anti-parallel
Strand 7
A
201 202anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
5 7anti-parallel
Strand 3
B
124 128anti-parallel
Strand 4
B
141 145anti-parallel
Strand 5
B
232 237anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
49 56parallel
Strand 3
B
37 43anti-parallel
Strand 4
B
117 122anti-parallel
Strand 5
B
153 168anti-parallel
Strand 6
B
172 184anti-parallel
Strand 7
B
198 199anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
172 184parallel
Strand 3
B
49 56parallel
Strand 4
B
37 43anti-parallel
Strand 5
B
117 122anti-parallel
Strand 6
B
153 168anti-parallel
Strand 7
B
201 202anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 32first strand
Strand 2
C
5 7anti-parallel
Strand 3
C
124 128anti-parallel
Strand 4
C
141 145anti-parallel
Strand 5
C
232 237anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 22first strand
Strand 2
C
49 56parallel
Strand 3
C
37 43anti-parallel
Strand 4
C
117 122anti-parallel
Strand 5
C
153 166anti-parallel
Strand 6
C
173 184anti-parallel
Strand 7
C
198 199anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 100first strand
Strand 2
C
173 184parallel
Strand 3
C
49 56parallel
Strand 4
C
37 43anti-parallel
Strand 5
C
117 122anti-parallel
Strand 6
C
153 166anti-parallel
Strand 7
C
201 202anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il