Analysis of interatomic Contacts of Structural Units in PDB entry:
2AEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AEV entry

There are 2 chains in PDB entry 2AEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 9ASP 207
A
 LEU 209SER 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2AEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
43 50Right-handed alpha
Helix 4
4
A
51 53Right-handed 310
Helix 5
5
A
54 72Right-handed alpha
Helix 6
6
A
84 97Right-handed alpha
Helix 7
7
A
112 121Right-handed alpha
Helix 8
8
A
130 136Right-handed alpha
Helix 9
9
A
157 172Right-handed alpha
Helix 10
10
A
181 189Right-handed alpha
Helix 11
11
A
222 234Right-handed alpha
Helix 12
12
A
240 254Right-handed alpha
Helix 13
13
A
255 269Right-handed alpha
Helix 14
14
A
271 282Right-handed alpha
Helix 15
15
A
307 327Right-handed alpha
Helix 16
16
A
330 334Right-handed 310
Helix 17
17
A
349 355Right-handed 310
Helix 18
18
A
356 372Right-handed alpha
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There are 3 sheets in PDB entry 2AEV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
328 329parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 82first strand
Strand 2
A
216 221anti-parallel
Strand 3
A
201 205anti-parallel
Strand 4
A
175 178parallel
Strand 5
A
142 147parallel
Strand 6
A
100 104parallel
Strand 7
A
124 128parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 294first strand
Strand 2
A
298 305anti-parallel
Strand 3
A
343 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il