Analysis of interatomic Contacts of Structural Units in PDB entry:
2AG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AG8 entry

There is 1 chain in PDB entry 2AG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 2AG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
33 44Right-handed alpha
Helix 3
3
A
66 74Right-handed alpha
Helix 4
4
A
92 100Right-handed alpha
Helix 5
5
A
112 118Right-handed 310
Helix 6
6
A
131 144Right-handed alpha
Helix 7
7
A
155 164Right-handed alpha
Helix 8
8
A
166 185Right-handed alpha
Helix 9
9
A
188 211Right-handed alpha
Helix 10
10
A
213 221Right-handed alpha
Helix 11
11
A
226 238Right-handed alpha
Helix 12
12
A
239 261Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2AG8.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
26 30parallel
Strand 3
A
2 6parallel
Strand 4
A
60 63parallel
Strand 5
A
83 86parallel
Strand 6
A
106 110parallel
Strand 7
A
120 125anti-parallel
Strand 8
A
146 150parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il