Analysis of interatomic Contacts of Structural Units in PDB entry:
2AGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AGH entry

There are 3 chains in PDB entry 2AGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 291LEU 315
B
 GLY 586LEU 672
C
 SER 839SER 869
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2AGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
292 304Right-handed alpha
Helix 2
2
A
304 311Right-handed alpha
Helix 3
3
B
591 595Right-handed 310
Helix 4
4
B
596 612Right-handed alpha
Helix 5
5
B
616 621Right-handed 310
Helix 6
6
B
622 623Right-handed 310
Helix 7
7
B
624 642Right-handed alpha
Helix 8
8
B
645 668Right-handed alpha
Helix 9
9
C
846 857Right-handed alpha
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There are no sheets in PDB entry 2AGH
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il