Analysis of interatomic Contacts of Structural Units in PDB entry:
2AOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AOL entry

There is 1 chain in PDB entry 2AOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1TYR 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2AOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 31Right-handed alpha
Helix 2
2
A
50 63Right-handed alpha
Helix 3
3
A
64 67Right-handed 310
Helix 4
4
A
81 89Right-handed alpha
Helix 5
5
A
92 94Right-handed 310
Helix 6
6
A
107 128Right-handed alpha
Helix 7
7
A
134 139Right-handed alpha
Helix 8
8
A
146 153Right-handed alpha
Helix 9
9
A
156 158Right-handed 310
Helix 10
10
A
168 172Right-handed 310
Helix 11
11
A
175 177Right-handed 310
Helix 12
12
A
178 207Right-handed alpha
Helix 13
13
A
208 211Right-handed 310
Helix 14
14
A
212 227Right-handed alpha
Helix 15
15
A
239 243Right-handed 310
Helix 16
16
A
244 258Right-handed alpha
Helix 17
17
A
282 287Right-handed 310
Helix 18
18
A
288 295Right-handed alpha
Helix 19
19
A
315 334Right-handed alpha
Helix 20
20
A
336 348Right-handed alpha
Helix 21
21
A
358 363Right-handed alpha
Helix 22
22
A
379 402Right-handed alpha
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There are 3 sheets in PDB entry 2AOL. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
8 9anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
43 47parallel
Strand 3
A
96 101parallel
Strand 4
A
140 143parallel
Strand 5
A
160 161parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 277first strand
Strand 2
A
232 237parallel
Strand 3
A
301 306parallel
Strand 4
A
371 375parallel
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