Analysis of interatomic Contacts of Structural Units in PDB entry:
2AOR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AOR entry

There are 6 chains in PDB entry 2AOR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 C 1 G 4
C
 T 6 G 22
D
 C 1 G 4
D
 T 6 G 22
A
 MET 9THR 228
B
 MET 9LYS 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2AOR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 25Right-handed alpha
Helix 2
2
A
28 36Right-handed alpha
Helix 3
3
A
49 60Right-handed alpha
Helix 4
4
A
111 118Right-handed alpha
Helix 5
5
A
132 136Right-handed 310
Helix 6
6
A
147 167Right-handed alpha
Helix 7
7
A
169 173Right-handed 310
Helix 8
8
A
214 227Right-handed alpha
Helix 9
9
B
13 25Right-handed alpha
Helix 10
10
B
28 36Right-handed alpha
Helix 11
11
B
49 60Right-handed alpha
Helix 12
12
B
107 110Right-handed 310
Helix 13
13
B
111 117Right-handed alpha
Helix 14
14
B
132 136Right-handed 310
Helix 15
15
B
147 167Right-handed alpha
Helix 16
16
B
169 173Right-handed 310
Helix 17
17
B
214 228Right-handed alpha
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There are 6 sheets in PDB entry 2AOR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 83first strand
Strand 2
A
120 126parallel
Strand 3
A
142 144anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 97first strand
Strand 2
A
209 213anti-parallel
Strand 3
A
181 185anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
203 206anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 83first strand
Strand 2
B
120 126parallel
Strand 3
B
142 144anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 97first strand
Strand 2
B
209 213anti-parallel
Strand 3
B
181 185anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 197first strand
Strand 2
B
203 206anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il