Analysis of interatomic Contacts of Structural Units in PDB entry:
2ATX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ATX entry

There are 2 chains in PDB entry 2ATX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8PRO 193
B
 SER 8PRO 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2ATX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 40Right-handed alpha
Helix 2
2
A
81 86Right-handed 310
Helix 3
3
A
100 110Right-handed alpha
Helix 4
4
A
110 119Right-handed alpha
Helix 5
5
A
136 144Right-handed alpha
Helix 6
6
A
152 164Right-handed alpha
Helix 7
7
A
178 192Right-handed alpha
Helix 8
8
B
29 40Right-handed alpha
Helix 9
9
B
81 86Right-handed 310
Helix 10
10
B
100 110Right-handed alpha
Helix 11
11
B
110 119Right-handed alpha
Helix 12
12
B
130 135Right-handed 310
Helix 13
13
B
136 144Right-handed alpha
Helix 14
14
B
145 147Right-handed 310
Helix 15
15
B
152 163Right-handed alpha
Helix 16
16
B
178 192Right-handed alpha
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There are 2 sheets in PDB entry 2ATX. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
124 129parallel
Strand 3
A
91 97parallel
Strand 4
A
14 24parallel
Strand 5
A
64 70parallel
Strand 6
A
54 59anti-parallel
Strand 7
B
14 24anti-parallel
Strand 8
B
91 97parallel
Strand 9
B
124 129parallel
Strand 10
B
168 170parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
124 129parallel
Strand 3
A
91 97parallel
Strand 4
A
14 24parallel
Strand 5
B
54 59anti-parallel
Strand 6
B
64 71anti-parallel
Strand 7
B
14 24parallel
Strand 8
B
91 97parallel
Strand 9
B
124 129parallel
Strand 10
B
168 170parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il