Analysis of interatomic Contacts of Structural Units in PDB entry:
2AUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AUC entry

There are 4 chains in PDB entry 2AUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 88ILE 203
B
 GLY 89LEU 204
C
 LYS 79LEU 204
D
 LEU 804VAL 816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2AUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
92 103Right-handed alpha
Helix 2
2
A
108 120Right-handed alpha
Helix 3
3
A
124 153Right-handed alpha
Helix 4
4
A
162 170Right-handed alpha
Helix 5
5
A
177 189Right-handed alpha
Helix 6
6
A
196 201Right-handed alpha
Helix 7
7
B
93 102Right-handed alpha
Helix 8
8
B
108 120Right-handed alpha
Helix 9
9
B
124 152Right-handed alpha
Helix 10
10
B
161 170Right-handed alpha
Helix 11
11
B
177 182Right-handed alpha
Helix 12
12
B
195 200Right-handed alpha
Helix 13
13
C
92 103Right-handed alpha
Helix 14
14
C
108 120Right-handed alpha
Helix 15
15
C
124 151Right-handed alpha
Helix 16
16
C
162 172Right-handed alpha
Helix 17
17
C
177 189Right-handed alpha
Helix 18
18
C
196 204Right-handed alpha
Helix 19
19
D
806 814Right-handed alpha
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There are 3 sheets in PDB entry 2AUC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
193 195anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 92first strand
Strand 2
B
122 123anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 161first strand
Strand 2
C
193 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il