Analysis of interatomic Contacts of Structural Units in PDB entry:
2AUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AUS entry

There are 4 chains in PDB entry 2AUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 12TRP 334
D
 ARG 4GLY 56
A
 ALA 12TRP 334
B
 ARG 4GLY 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2AUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
34 38Right-handed 310
Helix 2
2
C
39 46Right-handed alpha
Helix 3
3
C
58 70Right-handed alpha
Helix 4
4
C
95 104Right-handed 310
Helix 5
5
C
121 132Right-handed alpha
Helix 6
6
C
179 192Right-handed alpha
Helix 7
7
C
216 229Right-handed alpha
Helix 8
8
C
233 240Right-handed alpha
Helix 9
9
C
244 248Right-handed 310
Helix 10
10
C
256 265Right-handed alpha
Helix 11
11
C
305 312Right-handed alpha
Helix 12
12
D
41 53Right-handed alpha
Helix 13
13
A
34 38Right-handed 310
Helix 14
14
A
39 46Right-handed alpha
Helix 15
15
A
58 70Right-handed alpha
Helix 16
16
A
95 104Right-handed 310
Helix 17
17
A
121 132Right-handed alpha
Helix 18
18
A
179 191Right-handed alpha
Helix 19
19
A
216 229Right-handed alpha
Helix 20
20
A
233 240Right-handed alpha
Helix 21
21
A
244 248Right-handed 310
Helix 22
22
A
256 265Right-handed alpha
Helix 23
23
A
305 312Right-handed alpha
Helix 24
24
B
41 54Right-handed alpha
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There are 5 sheets in PDB entry 2AUS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
269 270first strand
Strand 2
C
316 323anti-parallel
Strand 3
C
296 302anti-parallel
Strand 4
C
286 291anti-parallel
Strand 5
C
252 255parallel
Strand 6
C
274 278anti-parallel
Strand 7
C
18 20anti-parallel
Strand 8
A
18 20parallel
Strand 9
A
274 278anti-parallel
Strand 10
A
252 255anti-parallel
Strand 11
A
286 290parallel
Strand 12
A
296 302anti-parallel
Strand 13
A
316 323anti-parallel
Strand 14
A
269 270anti-parallel
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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 137first strand
Strand 2
C
152 164anti-parallel
Strand 3
C
167 174anti-parallel
Strand 4
C
108 116anti-parallel
Strand 5
C
195 205anti-parallel
Strand 6
C
208 209anti-parallel
Strand 7
C
195 205anti-parallel
Strand 8
C
86 93parallel
Strand 9
C
75 77anti-parallel
Strand 10
C
86 93anti-parallel
Strand 11
C
47 53anti-parallel
Strand 12
C
241 242anti-parallel
Strand 13
C
47 53anti-parallel
Strand 14
C
214 215parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 15first strand
Strand 2
D
6 7anti-parallel
Strand 3
D
28 29anti-parallel
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There are 14 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
154 164anti-parallel
Strand 3
A
167 175anti-parallel
Strand 4
A
107 116anti-parallel
Strand 5
A
195 205anti-parallel
Strand 6
A
208 209anti-parallel
Strand 7
A
195 205anti-parallel
Strand 8
A
86 93parallel
Strand 9
A
75 77anti-parallel
Strand 10
A
86 93anti-parallel
Strand 11
A
47 53anti-parallel
Strand 12
A
241 242anti-parallel
Strand 13
A
47 53anti-parallel
Strand 14
A
214 215parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 15first strand
Strand 2
B
6 7anti-parallel
Strand 3
B
28 29anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il