Analysis of interatomic Contacts of Structural Units in PDB entry:
2AXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AXC entry

There is 1 chain in PDB entry 2AXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 75PRO 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 2AXC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
108 117Right-handed alpha
Helix 2
2
A
135 143Right-handed alpha
Helix 3
3
A
157 159Right-handed 310
Helix 4
4
A
163 167Right-handed 310
Helix 5
5
A
270 274Right-handed 310
Helix 6
6
A
287 308Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2AXC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
149 155anti-parallel
Strand 3
A
278 284anti-parallel
Strand 4
A
262 268anti-parallel
Strand 5
A
199 205parallel
Strand 6
A
173 176anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
222 229parallel
Strand 3
A
214 219anti-parallel
Strand 4
A
207 208anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 185first strand
Strand 2
A
188 195anti-parallel
Strand 3
A
127 134anti-parallel
Strand 4
A
243 245anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 185first strand
Strand 2
A
188 195anti-parallel
Strand 3
A
127 134anti-parallel
Strand 4
A
252 253anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il