Analysis of interatomic Contacts of Structural Units in PDB entry:
2AXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AXQ entry

There is 1 chain in PDB entry 2AXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ALA 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 2AXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
57 67Right-handed alpha
Helix 4
4
A
76 78Right-handed 310
Helix 5
5
A
79 91Right-handed alpha
Helix 6
6
A
101 115Right-handed alpha
Helix 7
7
A
127 143Right-handed alpha
Helix 8
8
A
160 163Right-handed 310
Helix 9
9
A
175 181Right-handed alpha
Helix 10
10
A
182 184Right-handed 310
Helix 11
11
A
201 206Right-handed alpha
Helix 12
12
A
227 232Right-handed alpha
Helix 13
13
A
249 260Right-handed alpha
Helix 14
14
A
268 272Right-handed 310
Helix 15
15
A
276 286Right-handed alpha
Helix 16
16
A
291 301Right-handed alpha
Helix 17
17
A
307 321Right-handed alpha
Helix 18
18
A
334 347Right-handed alpha
Helix 19
19
A
389 408Right-handed alpha
Helix 20
20
A
421 437Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2AXQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
27 33parallel
Strand 3
A
3 8parallel
Strand 4
A
70 73parallel
Strand 5
A
93 96parallel
Strand 6
A
117 119parallel
Strand 7
A
415 417parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
217 221anti-parallel
Strand 3
A
239 247anti-parallel
Strand 4
A
146 158parallel
Strand 5
A
355 366anti-parallel
Strand 6
A
372 382anti-parallel
Strand 7
A
441 444anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
193 197anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il