Analysis of interatomic Contacts of Structural Units in PDB entry:
2B0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B0C entry

There is 1 chain in PDB entry 2B0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6VAL 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2B0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 35Right-handed alpha
Helix 2
2
A
37 45Right-handed alpha
Helix 3
3
A
48 56Right-handed alpha
Helix 4
4
A
60 73Right-handed alpha
Helix 5
5
A
77 87Right-handed alpha
Helix 6
6
A
93 106Right-handed alpha
Helix 7
7
A
124 127Right-handed 310
Helix 8
8
A
128 135Right-handed alpha
Helix 9
9
A
141 145Right-handed alpha
Helix 10
10
A
150 162Right-handed alpha
Helix 11
11
A
164 166Right-handed 310
Helix 12
12
A
174 183Right-handed alpha
Helix 13
13
A
195 203Right-handed alpha
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There are 2 sheets in PDB entry 2B0C. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
109 114parallel
Strand 3
A
9 12parallel
Strand 4
A
168 172parallel
Strand 5
A
187 190parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
89 92anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il