Analysis of interatomic Contacts of Structural Units in PDB entry:
2B0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B0F entry

There are 2 chains in PDB entry 2B0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLN 182
B
 LEU 2PHE 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 2B0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 14Right-handed alpha
Helix 2
2
A
85 90Right-handed 310
Helix 3
3
A
174 179Right-handed alpha
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There are 2 sheets in PDB entry 2B0F. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
24 31anti-parallel
Strand 3
A
34 37anti-parallel
Strand 4
A
68 78anti-parallel
Strand 5
A
52 64anti-parallel
Strand 6
A
46 49anti-parallel
Strand 7
A
15 19anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 126first strand
Strand 2
A
130 138anti-parallel
Strand 3
A
167 172anti-parallel
Strand 4
A
155 164anti-parallel
Strand 5
A
111 126first strand
Strand 6
A
98 103anti-parallel
Strand 7
A
149 152anti-parallel
Strand 8
A
155 164anti-parallel
Strand 9
B
3 6anti-parallel
Strand 10
A
155 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il