Analysis of interatomic Contacts of Structural Units in PDB entry:
2B0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B0R entry

There are 2 chains in PDB entry 2B0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 35SER 198
B
 ARG 35SER 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2B0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
145 149Right-handed 310
Helix 2
2
B
188 191Right-handed 310
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There are 4 sheets in PDB entry 2B0R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
51 55anti-parallel
Strand 3
A
74 81parallel
Strand 4
A
93 106parallel
Strand 5
A
119 125parallel
Strand 6
A
138 143parallel
Strand 7
A
159 166parallel
Strand 8
A
173 177anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
84 87parallel
Strand 3
A
93 106parallel
Strand 4
A
112 116parallel
Strand 5
A
131 135parallel
Strand 6
A
152 156parallel
Strand 7
B
182 187anti-parallel
Strand 8
B
192 197anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
182 187anti-parallel
Strand 3
B
152 156anti-parallel
Strand 4
B
131 135parallel
Strand 5
B
112 116parallel
Strand 6
B
93 106parallel
Strand 7
B
84 87parallel
Strand 8
B
64 66parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 48first strand
Strand 2
B
51 55anti-parallel
Strand 3
B
74 81parallel
Strand 4
B
93 106parallel
Strand 5
B
119 125parallel
Strand 6
B
138 143parallel
Strand 7
B
159 165parallel
Strand 8
B
174 177anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il