Analysis of interatomic Contacts of Structural Units in PDB entry:
2B0T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B0T entry

There is 1 chain in PDB entry 2B0T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2B0T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 30Right-handed alpha
Helix 2
2
A
41 48Right-handed alpha
Helix 3
3
A
49 54Right-handed 310
Helix 4
4
A
62 71Right-handed alpha
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
114 126Right-handed alpha
Helix 7
7
A
131 137Right-handed alpha
Helix 8
8
A
146 156Right-handed alpha
Helix 9
9
A
178 183Right-handed alpha
Helix 10
10
A
226 245Right-handed alpha
Helix 11
11
A
259 273Right-handed alpha
Helix 12
12
A
273 287Right-handed alpha
Helix 13
13
A
293 303Right-handed alpha
Helix 14
14
A
307 322Right-handed alpha
Helix 15
15
A
330 333Right-handed 310
Helix 16
16
A
344 355Right-handed alpha
Helix 17
17
A
375 393Right-handed alpha
Helix 18
18
A
413 420Right-handed 310
Helix 19
19
A
458 477Right-handed alpha
Helix 20
20
A
488 503Right-handed alpha
Helix 21
21
A
516 530Right-handed alpha
Helix 22
22
A
539 556Right-handed alpha
Helix 23
23
A
582 593Right-handed alpha
Helix 24
24
A
599 618Right-handed alpha
Helix 25
25
A
619 639Right-handed alpha
Helix 26
26
A
651 670Right-handed alpha
Helix 27
27
A
673 701Right-handed alpha
Helix 28
28
A
715 724Right-handed alpha
Helix 29
29
A
726 736Right-handed alpha
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There are 6 sheets in PDB entry 2B0T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
3 8parallel
Strand 3
A
77 80parallel
Strand 4
A
572 575parallel
Strand 5
A
562 566anti-parallel
Strand 6
A
141 144anti-parallel
Strand 7
A
405 407anti-parallel
Strand 8
A
535 538parallel
Strand 9
A
480 483parallel
Strand 10
A
512 515parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
366 372parallel
Strand 3
A
247 250parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
366 372parallel
Strand 3
A
358 360anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
219 225anti-parallel
Strand 3
A
451 457anti-parallel
Strand 4
A
422 424anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 214first strand
Strand 2
A
192 199anti-parallel
Strand 3
A
429 434anti-parallel
Strand 4
A
440 446anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 329first strand
Strand 2
A
334 335anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il