Analysis of interatomic Contacts of Structural Units in PDB entry:
2B24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B24 entry

There are 6 chains in PDB entry 2B24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 440
B
 SER 515MET 679
C
 MET 1PRO 440
D
 SER 515MET 679
E
 MET 1PRO 440
F
 SER 515MET 679
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 2B24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 17Right-handed alpha
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
30 41Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
136 140Right-handed 310
Helix 6
6
A
165 171Right-handed alpha
Helix 7
7
A
173 182Right-handed alpha
Helix 8
8
A
203 213Right-handed alpha
Helix 9
9
A
214 219Right-handed 310
Helix 10
10
A
221 227Right-handed alpha
Helix 11
11
A
269 280Right-handed alpha
Helix 12
12
A
281 289Right-handed alpha
Helix 13
13
A
347 362Right-handed alpha
Helix 14
14
A
368 383Right-handed alpha
Helix 15
15
A
385 391Right-handed alpha
Helix 16
16
A
421 437Right-handed alpha
Helix 17
17
B
518 534Right-handed alpha
Helix 18
18
B
537 542Right-handed alpha
Helix 19
19
B
577 590Right-handed alpha
Helix 20
20
C
3 17Right-handed alpha
Helix 21
21
C
26 28Right-handed 310
Helix 22
22
C
30 41Right-handed alpha
Helix 23
23
C
136 140Right-handed 310
Helix 24
24
C
165 171Right-handed alpha
Helix 25
25
C
173 182Right-handed alpha
Helix 26
26
C
203 213Right-handed alpha
Helix 27
27
C
214 218Right-handed 310
Helix 28
28
C
221 227Right-handed alpha
Helix 29
29
C
269 280Right-handed alpha
Helix 30
30
C
281 289Right-handed alpha
Helix 31
31
C
347 360Right-handed alpha
Helix 32
32
C
368 383Right-handed alpha
Helix 33
33
C
421 437Right-handed alpha
Helix 34
34
D
518 534Right-handed alpha
Helix 35
35
D
537 542Right-handed alpha
Helix 36
36
D
577 590Right-handed alpha
Helix 37
37
E
3 17Right-handed alpha
Helix 38
38
E
26 28Right-handed 310
Helix 39
39
E
30 41Right-handed alpha
Helix 40
40
E
53 55Right-handed 310
Helix 41
41
E
136 140Right-handed 310
Helix 42
42
E
165 171Right-handed alpha
Helix 43
43
E
173 182Right-handed alpha
Helix 44
44
E
203 213Right-handed alpha
Helix 45
45
E
214 219Right-handed 310
Helix 46
46
E
221 227Right-handed alpha
Helix 47
47
E
235 238Right-handed 310
Helix 48
48
E
269 280Right-handed alpha
Helix 49
49
E
281 289Right-handed alpha
Helix 50
50
E
347 362Right-handed alpha
Helix 51
51
E
368 383Right-handed alpha
Helix 52
52
E
421 437Right-handed alpha
Helix 53
53
F
518 534Right-handed alpha
Helix 54
54
F
537 542Right-handed alpha
Helix 55
55
F
577 590Right-handed alpha
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There are 21 sheets in PDB entry 2B24. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
392 394anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
154 158anti-parallel
Strand 3
A
147 151anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 85first strand
Strand 2
A
69 75anti-parallel
Strand 3
A
60 66anti-parallel
Strand 4
A
100 102anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
114 116anti-parallel
Strand 3
A
121 123anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 190first strand
Strand 2
A
341 343anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 199first strand
Strand 2
A
333 338anti-parallel
Strand 3
A
318 330anti-parallel
Strand 4
A
302 309anti-parallel
Strand 5
A
293 298anti-parallel
Strand 6
A
250 254anti-parallel
Strand 7
A
240 241anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
567 576first strand
Strand 2
B
550 556anti-parallel
Strand 3
B
655 665parallel
Strand 4
B
639 652anti-parallel
Strand 5
B
619 631anti-parallel
Strand 6
B
601 613anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
392 394anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
154 158anti-parallel
Strand 3
C
147 151anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 85first strand
Strand 2
C
69 75anti-parallel
Strand 3
C
60 66anti-parallel
Strand 4
C
100 102anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
105 107first strand
Strand 2
C
114 116anti-parallel
Strand 3
C
121 123anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 190first strand
Strand 2
C
341 343anti-parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 199first strand
Strand 2
C
333 338anti-parallel
Strand 3
C
318 330anti-parallel
Strand 4
C
302 309anti-parallel
Strand 5
C
293 298anti-parallel
Strand 6
C
250 254anti-parallel
Strand 7
C
240 241anti-parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
567 576first strand
Strand 2
D
550 556anti-parallel
Strand 3
D
655 665parallel
Strand 4
D
639 652anti-parallel
Strand 5
D
619 631anti-parallel
Strand 6
D
601 613anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 24first strand
Strand 2
E
392 394anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 51first strand
Strand 2
E
154 158anti-parallel
Strand 3
E
147 151anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 85first strand
Strand 2
E
69 75anti-parallel
Strand 3
E
60 66anti-parallel
Strand 4
E
100 102anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
105 107first strand
Strand 2
E
114 116anti-parallel
Strand 3
E
121 123anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
188 190first strand
Strand 2
E
333 343anti-parallel
Strand 3
E
195 199anti-parallel
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There are 7 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
188 190first strand
Strand 2
E
333 343anti-parallel
Strand 3
E
318 330anti-parallel
Strand 4
E
302 309anti-parallel
Strand 5
E
293 298anti-parallel
Strand 6
E
250 254anti-parallel
Strand 7
E
240 241anti-parallel
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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
567 576first strand
Strand 2
F
551 556anti-parallel
Strand 3
F
655 665parallel
Strand 4
F
639 652anti-parallel
Strand 5
F
619 631anti-parallel
Strand 6
F
601 613anti-parallel
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