Analysis of interatomic Contacts of Structural Units in PDB entry:
2B34

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2B34 entry

There are 8 chains in PDB entry 2B34 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 8	LEU 199
B	ALA 8	LEU 199
C	ALA 8	LEU 199
D	ALA 8	LEU 199
E	ALA 8	LEU 199
F	ALA 8	LEU 199
G	ALA 8	LEU 199
H	ALA 8	LEU 199

There are 84 helices in PDB entry 2B34. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	27	Right-handed 310
Helix 2	2	A	32	50	Right-handed alpha
Helix 3	3	A	60	65	Right-handed alpha
Helix 4	4	A	68	75	Right-handed alpha
Helix 5	5	A	91	93	Right-handed 310
Helix 6	6	A	94	99	Right-handed alpha
Helix 7	7	A	113	125	Right-handed alpha
Helix 8	8	A	140	155	Right-handed alpha
Helix 9	9	A	160	170	Right-handed alpha
Helix 10	10	A	176	184	Right-handed alpha
Helix 11	11	B	23	27	Right-handed 310
Helix 12	12	B	32	50	Right-handed alpha
Helix 13	13	B	60	65	Right-handed alpha
Helix 14	14	B	68	73	Right-handed alpha
Helix 15	15	B	91	93	Right-handed 310
Helix 16	16	B	94	100	Right-handed alpha
Helix 17	17	B	113	125	Right-handed alpha
Helix 18	18	B	140	155	Right-handed alpha
Helix 19	19	B	160	170	Right-handed alpha
Helix 20	20	B	176	182	Right-handed alpha
Helix 21	21	B	183	185	Right-handed 310
Helix 22	22	C	23	27	Right-handed 310
Helix 23	23	C	32	50	Right-handed alpha
Helix 24	24	C	60	65	Right-handed alpha
Helix 25	25	C	68	73	Right-handed alpha
Helix 26	26	C	91	93	Right-handed 310
Helix 27	27	C	94	101	Right-handed alpha
Helix 28	28	C	113	125	Right-handed alpha
Helix 29	29	C	140	155	Right-handed alpha
Helix 30	30	C	160	170	Right-handed alpha
Helix 31	31	C	176	182	Right-handed alpha
Helix 32	32	C	183	185	Right-handed 310
Helix 33	33	D	32	50	Right-handed alpha
Helix 34	34	D	60	65	Right-handed alpha
Helix 35	35	D	68	73	Right-handed alpha
Helix 36	36	D	91	93	Right-handed 310
Helix 37	37	D	94	99	Right-handed alpha
Helix 38	38	D	113	125	Right-handed alpha
Helix 39	39	D	140	155	Right-handed alpha
Helix 40	40	D	160	170	Right-handed alpha
Helix 41	41	D	176	182	Right-handed alpha
Helix 42	42	D	183	185	Right-handed 310
Helix 43	43	E	23	27	Right-handed 310
Helix 44	44	E	32	50	Right-handed alpha
Helix 45	45	E	60	65	Right-handed alpha
Helix 46	46	E	68	75	Right-handed alpha
Helix 47	47	E	91	93	Right-handed 310
Helix 48	48	E	94	101	Right-handed alpha
Helix 49	49	E	113	125	Right-handed alpha
Helix 50	50	E	140	155	Right-handed alpha
Helix 51	51	E	160	170	Right-handed alpha
Helix 52	52	E	176	184	Right-handed alpha
Helix 53	53	F	23	27	Right-handed 310
Helix 54	54	F	32	50	Right-handed alpha
Helix 55	55	F	60	65	Right-handed alpha
Helix 56	56	F	68	75	Right-handed alpha
Helix 57	57	F	91	93	Right-handed 310
Helix 58	58	F	94	101	Right-handed alpha
Helix 59	59	F	113	125	Right-handed alpha
Helix 60	60	F	140	155	Right-handed alpha
Helix 61	61	F	160	170	Right-handed alpha
Helix 62	62	F	176	182	Right-handed alpha
Helix 63	63	F	183	185	Right-handed 310
Helix 64	64	G	23	30	Right-handed 310
Helix 65	65	G	32	50	Right-handed alpha
Helix 66	66	G	60	65	Right-handed alpha
Helix 67	67	G	68	75	Right-handed alpha
Helix 68	68	G	91	93	Right-handed 310
Helix 69	69	G	94	99	Right-handed alpha
Helix 70	70	G	113	125	Right-handed alpha
Helix 71	71	G	140	155	Right-handed alpha
Helix 72	72	G	160	170	Right-handed alpha
Helix 73	73	G	176	182	Right-handed alpha
Helix 74	74	G	183	185	Right-handed 310
Helix 75	75	H	23	29	Right-handed 310
Helix 76	76	H	32	50	Right-handed alpha
Helix 77	77	H	60	65	Right-handed alpha
Helix 78	78	H	68	73	Right-handed alpha
Helix 79	79	H	91	93	Right-handed 310
Helix 80	80	H	94	99	Right-handed alpha
Helix 81	81	H	113	126	Right-handed alpha
Helix 82	82	H	140	155	Right-handed alpha
Helix 83	83	H	160	170	Right-handed alpha
Helix 84	84	H	176	184	Right-handed alpha

There are 8 sheets in PDB entry 2B34. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	54	59	parallel
Strand 3	A	15	20	parallel
Strand 4	A	103	109	parallel
Strand 5	A	128	137	parallel
Strand 6	A	157	159	parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	84	first strand
Strand 2	B	54	59	parallel
Strand 3	B	15	20	parallel
Strand 4	B	103	109	parallel
Strand 5	B	128	137	parallel
Strand 6	B	157	159	parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	84	first strand
Strand 2	C	54	59	parallel
Strand 3	C	15	20	parallel
Strand 4	C	103	109	parallel
Strand 5	C	128	137	parallel
Strand 6	C	157	159	parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	84	first strand
Strand 2	D	54	59	parallel
Strand 3	D	15	20	parallel
Strand 4	D	103	109	parallel
Strand 5	D	128	137	parallel
Strand 6	D	157	159	parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	84	first strand
Strand 2	E	54	59	parallel
Strand 3	E	15	20	parallel
Strand 4	E	103	109	parallel
Strand 5	E	128	137	parallel
Strand 6	E	157	159	parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	84	first strand
Strand 2	F	54	59	parallel
Strand 3	F	15	20	parallel
Strand 4	F	103	109	parallel
Strand 5	F	128	137	parallel
Strand 6	F	157	159	parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	81	84	first strand
Strand 2	G	54	59	parallel
Strand 3	G	15	20	parallel
Strand 4	G	103	109	parallel
Strand 5	G	128	137	parallel
Strand 6	G	157	159	parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	81	84	first strand
Strand 2	H	54	59	parallel
Strand 3	H	15	20	parallel
Strand 4	H	103	109	parallel
Strand 5	H	128	137	parallel
Strand 6	H	157	159	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2B34

Analysis of interatomic Contacts of Structural Units in PDB entry:
2B34