Analysis of interatomic Contacts of Structural Units in PDB entry:
2B3Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B3Y entry

There are 2 chains in PDB entry 2B3Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 889
B
 SER 2LYS 889
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 2B3Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 7Right-handed 310
Helix 2
2
A
24 28Right-handed 310
Helix 3
3
A
31 35Right-handed 310
Helix 4
4
A
36 49Right-handed alpha
Helix 5
5
A
56 65Right-handed alpha
Helix 6
6
A
65 70Right-handed alpha
Helix 7
7
A
87 107Right-handed alpha
Helix 8
8
A
110 114Right-handed 310
Helix 9
9
A
137 164Right-handed alpha
Helix 10
10
A
176 184Right-handed alpha
Helix 11
11
A
205 215Right-handed 310
Helix 12
12
A
222 231Right-handed alpha
Helix 13
13
A
256 272Right-handed alpha
Helix 14
14
A
282 286Right-handed 310
Helix 15
15
A
289 299Right-handed alpha
Helix 16
16
A
299 304Right-handed alpha
Helix 17
17
A
313 323Right-handed alpha
Helix 18
18
A
326 341Right-handed alpha
Helix 19
19
A
348 352Right-handed 310
Helix 20
20
A
364 366Right-handed 310
Helix 21
21
A
384 395Right-handed alpha
Helix 22
22
A
405 409Right-handed 310
Helix 23
23
A
436 441Right-handed alpha
Helix 24
24
A
442 459Right-handed alpha
Helix 25
25
A
475 485Right-handed alpha
Helix 26
26
A
487 494Right-handed alpha
Helix 27
27
A
503 508Right-handed 310
Helix 28
28
A
514 525Right-handed alpha
Helix 29
29
A
553 564Right-handed alpha
Helix 30
30
A
585 590Right-handed alpha
Helix 31
31
A
592 604Right-handed alpha
Helix 32
32
A
605 614Right-handed alpha
Helix 33
33
A
620 626Right-handed alpha
Helix 34
34
A
646 650Right-handed 310
Helix 35
35
A
676 681Right-handed alpha
Helix 36
36
A
690 699Right-handed alpha
Helix 37
37
A
702 706Right-handed 310
Helix 38
38
A
709 713Right-handed 310
Helix 39
39
A
715 722Right-handed alpha
Helix 40
40
A
752 762Right-handed alpha
Helix 41
41
A
781 790Right-handed alpha
Helix 42
42
A
801 811Right-handed alpha
Helix 43
43
A
823 828Right-handed alpha
Helix 44
44
A
867 877Right-handed alpha
Helix 45
45
A
878 889Right-handed alpha
Helix 46
46
B
5 7Right-handed 310
Helix 47
47
B
24 28Right-handed 310
Helix 48
48
B
31 35Right-handed 310
Helix 49
49
B
36 49Right-handed alpha
Helix 50
50
B
56 65Right-handed alpha
Helix 51
51
B
65 70Right-handed alpha
Helix 52
52
B
87 107Right-handed alpha
Helix 53
53
B
110 114Right-handed 310
Helix 54
54
B
137 164Right-handed alpha
Helix 55
55
B
176 184Right-handed alpha
Helix 56
56
B
205 215Right-handed 310
Helix 57
57
B
222 231Right-handed alpha
Helix 58
58
B
256 272Right-handed alpha
Helix 59
59
B
289 299Right-handed alpha
Helix 60
60
B
299 304Right-handed alpha
Helix 61
61
B
313 323Right-handed alpha
Helix 62
62
B
326 341Right-handed alpha
Helix 63
63
B
348 352Right-handed 310
Helix 64
64
B
364 366Right-handed 310
Helix 65
65
B
384 395Right-handed alpha
Helix 66
66
B
405 409Right-handed 310
Helix 67
67
B
436 441Right-handed alpha
Helix 68
68
B
442 459Right-handed alpha
Helix 69
69
B
475 485Right-handed alpha
Helix 70
70
B
487 494Right-handed alpha
Helix 71
71
B
503 508Right-handed 310
Helix 72
72
B
514 525Right-handed alpha
Helix 73
73
B
553 564Right-handed alpha
Helix 74
74
B
585 590Right-handed alpha
Helix 75
75
B
592 604Right-handed alpha
Helix 76
76
B
605 614Right-handed alpha
Helix 77
77
B
620 626Right-handed alpha
Helix 78
78
B
676 681Right-handed alpha
Helix 79
79
B
690 699Right-handed alpha
Helix 80
80
B
702 706Right-handed 310
Helix 81
81
B
709 713Right-handed 310
Helix 82
82
B
715 722Right-handed alpha
Helix 83
83
B
752 762Right-handed alpha
Helix 84
84
B
781 790Right-handed alpha
Helix 85
85
B
801 811Right-handed alpha
Helix 86
86
B
823 828Right-handed alpha
Helix 87
87
B
867 876Right-handed alpha
Helix 88
88
B
878 889Right-handed alpha
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There are 20 sheets in PDB entry 2B3Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
20 22anti-parallel
Strand 3
A
195 198parallel
Strand 4
A
189 192anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
235 238anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
120 123parallel
Strand 3
A
82 86parallel
Strand 4
A
200 203parallel
Strand 5
A
217 220parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
A
277 281parallel
Strand 3
A
242 248parallel
Strand 4
A
357 362parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
379 381anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 417first strand
Strand 2
A
420 425anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 471first strand
Strand 2
A
429 434parallel
Strand 3
A
529 532parallel
Strand 4
A
548 551parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
576 578first strand
Strand 2
A
582 584anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
662 670first strand
Strand 2
A
766 769parallel
Strand 3
A
792 797parallel
Strand 4
A
814 818parallel
Strand 5
A
858 863anti-parallel
Strand 6
A
848 853anti-parallel
Strand 7
A
835 837anti-parallel
Strand 8
A
662 670anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 742first strand
Strand 2
A
749 751anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
20 22anti-parallel
Strand 3
B
195 198parallel
Strand 4
B
189 192anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
235 238anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 170first strand
Strand 2
B
120 123parallel
Strand 3
B
82 86parallel
Strand 4
B
200 203parallel
Strand 5
B
217 220parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 309first strand
Strand 2
B
277 281parallel
Strand 3
B
242 248parallel
Strand 4
B
357 362parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 371first strand
Strand 2
B
379 381anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 417first strand
Strand 2
B
420 425anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 471first strand
Strand 2
B
429 434parallel
Strand 3
B
529 532parallel
Strand 4
B
548 551parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
576 578first strand
Strand 2
B
582 584anti-parallel
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There are 8 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
662 670first strand
Strand 2
B
766 769parallel
Strand 3
B
792 797parallel
Strand 4
B
814 817parallel
Strand 5
B
858 863anti-parallel
Strand 6
B
848 853anti-parallel
Strand 7
B
835 837anti-parallel
Strand 8
B
662 670anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 743first strand
Strand 2
B
748 751anti-parallel
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