Analysis of interatomic Contacts of Structural Units in PDB entry:
2B5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B5Y entry

There is 1 chain in PDB entry 2B5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2B5Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 27Right-handed alpha
Helix 2
2
A
43 59Right-handed alpha
Helix 3
3
A
72 76Right-handed 310
Helix 4
4
A
77 88Right-handed alpha
Helix 5
5
A
100 106Right-handed alpha
Helix 6
6
A
130 133Right-handed 310
Helix 7
7
A
134 147Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2B5Y.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
94 96anti-parallel
Strand 3
A
63 68parallel
Strand 4
A
32 37parallel
Strand 5
A
113 117anti-parallel
Strand 6
A
123 128anti-parallel
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