Analysis of interatomic Contacts of Structural Units in PDB entry:
2B69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B69 entry

There is 1 chain in PDB entry 2B69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4ALA 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2B69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
41 49Right-handed 310
Helix 3
3
A
80 85Right-handed alpha
Helix 4
4
A
87 110Right-handed alpha
Helix 5
5
A
120 123Right-handed 310
Helix 6
6
A
144 166Right-handed alpha
Helix 7
7
A
188 200Right-handed alpha
Helix 8
8
A
218 230Right-handed alpha
Helix 9
9
A
247 259Right-handed alpha
Helix 10
10
A
281 289Right-handed alpha
Helix 11
11
A
295 315Right-handed alpha
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There are 4 sheets in PDB entry 2B69. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
30 35parallel
Strand 3
A
6 10parallel
Strand 4
A
71 74parallel
Strand 5
A
112 118parallel
Strand 6
A
169 174parallel
Strand 7
A
237 239parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
216 217parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
264 267parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
244 246anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il