Analysis of interatomic Contacts of Structural Units in PDB entry:
2B84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B84 entry

There is 1 chain in PDB entry 2B84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1HIS 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2B84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 11Right-handed alpha
Helix 2
2
A
23 35Right-handed alpha
Helix 3
3
A
53 62Right-handed alpha
Helix 4
4
A
66 74Right-handed alpha
Helix 5
5
A
88 104Right-handed alpha
Helix 6
6
A
113 128Right-handed alpha
Helix 7
7
A
158 163Right-handed 310
Helix 8
8
A
178 191Right-handed alpha
Helix 9
9
A
198 207Right-handed alpha
Helix 10
10
A
212 224Right-handed alpha
Helix 11
11
A
227 237Right-handed alpha
Helix 12
12
A
250 263Right-handed alpha
Helix 13
13
A
268 275Right-handed alpha
Helix 14
14
A
276 278Right-handed 310
Helix 15
15
A
286 293Right-handed alpha
Helix 16
16
A
297 311Right-handed alpha
Helix 17
17
A
328 339Right-handed alpha
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There are 2 sheets in PDB entry 2B84. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 84first strand
Strand 2
A
133 139parallel
Strand 3
A
151 156parallel
Strand 4
A
42 47parallel
Strand 5
A
168 173parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
322 326anti-parallel
Strand 3
A
315 319anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il