Analysis of interatomic Contacts of Structural Units in PDB entry:
2B8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B8N entry

There are 2 chains in PDB entry 2B8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4VAL 417
B
 PRO 4VAL 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2B8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 21Right-handed alpha
Helix 2
2
A
23 30Right-handed alpha
Helix 3
3
A
31 36Right-handed alpha
Helix 4
4
A
48 61Right-handed alpha
Helix 5
5
A
94 109Right-handed alpha
Helix 6
6
A
124 129Right-handed alpha
Helix 7
7
A
137 151Right-handed alpha
Helix 8
8
A
154 164Right-handed alpha
Helix 9
9
A
171 178Right-handed alpha
Helix 10
10
A
197 201Right-handed 310
Helix 11
11
A
209 220Right-handed alpha
Helix 12
12
A
225 233Right-handed alpha
Helix 13
13
A
250 265Right-handed alpha
Helix 14
14
A
279 298Right-handed alpha
Helix 15
15
A
324 337Right-handed alpha
Helix 16
16
A
367 375Right-handed alpha
Helix 17
17
A
378 385Right-handed alpha
Helix 18
18
A
387 395Right-handed alpha
Helix 19
19
B
4 21Right-handed alpha
Helix 20
20
B
23 30Right-handed alpha
Helix 21
21
B
31 36Right-handed alpha
Helix 22
22
B
48 61Right-handed alpha
Helix 23
23
B
94 109Right-handed alpha
Helix 24
24
B
124 129Right-handed alpha
Helix 25
25
B
137 152Right-handed alpha
Helix 26
26
B
154 164Right-handed alpha
Helix 27
27
B
171 178Right-handed alpha
Helix 28
28
B
197 201Right-handed 310
Helix 29
29
B
209 220Right-handed alpha
Helix 30
30
B
225 233Right-handed alpha
Helix 31
31
B
250 265Right-handed alpha
Helix 32
32
B
279 298Right-handed alpha
Helix 33
33
B
324 337Right-handed alpha
Helix 34
34
B
367 375Right-handed alpha
Helix 35
35
B
378 385Right-handed alpha
Helix 36
36
B
387 395Right-handed alpha
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There are 4 sheets in PDB entry 2B8N. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 88first strand
Strand 2
A
64 72parallel
Strand 3
A
40 45parallel
Strand 4
A
116 121parallel
Strand 5
A
181 187parallel
Strand 6
A
243 249parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 276first strand
Strand 2
A
305 311parallel
Strand 3
A
410 416anti-parallel
Strand 4
A
343 349anti-parallel
Strand 5
A
361 365anti-parallel
Strand 6
A
398 399anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 88first strand
Strand 2
B
64 72parallel
Strand 3
B
40 45parallel
Strand 4
B
116 121parallel
Strand 5
B
181 187parallel
Strand 6
B
243 249parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 276first strand
Strand 2
B
305 311parallel
Strand 3
B
410 416anti-parallel
Strand 4
B
343 349anti-parallel
Strand 5
B
361 365anti-parallel
Strand 6
B
398 399anti-parallel
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