Analysis of interatomic Contacts of Structural Units in PDB entry:
2B94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B94 entry

There is 1 chain in PDB entry 2B94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -10TYR 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2B94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
21 31Right-handed alpha
Helix 3
3
A
68 78Right-handed alpha
Helix 4
4
A
114 119Right-handed alpha
Helix 5
5
A
128 142Right-handed alpha
Helix 6
6
A
156 161Right-handed alpha
Helix 7
7
A
166 173Right-handed alpha
Helix 8
8
A
181 193Right-handed alpha
Helix 9
9
A
205 209Right-handed 310
Helix 10
10
A
219 240Right-handed alpha
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There are 2 sheets in PDB entry 2B94. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
44 51anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
15 18parallel
Strand 5
A
82 91parallel
Strand 6
A
177 179anti-parallel
Strand 7
A
147 154parallel
Strand 8
A
102 111parallel
Strand 9
A
125 126anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
44 51anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
15 18parallel
Strand 5
A
82 91parallel
Strand 6
A
195 204parallel
Strand 7
A
102 111anti-parallel
Strand 8
A
125 126anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il