Analysis of interatomic Contacts of Structural Units in PDB entry:
2B9E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2B9E entry

There is 1 chain in PDB entry 2B9E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 133VAL 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2B9E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
146 157Right-handed alpha
Helix 2
2
A
167 173Right-handed alpha
Helix 3
3
A
200 205Right-handed alpha
Helix 4
4
A
213 215Right-handed 310
Helix 5
5
A
216 223Right-handed alpha
Helix 6
6
A
238 249Right-handed alpha
Helix 7
7
A
260 274Right-handed alpha
Helix 8
8
A
285 289Right-handed 310
Helix 9
9
A
293 297Right-handed 310
Helix 10
10
A
330 346Right-handed alpha
Helix 11
11
A
362 365Right-handed 310
Helix 12
12
A
366 375Right-handed alpha
Helix 13
13
A
400 404Right-handed 310
Helix 14
14
A
408 413Right-handed alpha
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There are 3 sheets in PDB entry 2B9E. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 164first strand
Strand 2
A
178 181parallel
Strand 3
A
188 191anti-parallel
Strand 4
A
136 140anti-parallel
Strand 5
A
208 210anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 283first strand
Strand 2
A
253 258parallel
Strand 3
A
229 232parallel
Strand 4
A
299 304parallel
Strand 5
A
353 358parallel
Strand 6
A
417 424anti-parallel
Strand 7
A
381 383anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 283first strand
Strand 2
A
253 258parallel
Strand 3
A
229 232parallel
Strand 4
A
299 304parallel
Strand 5
A
353 358parallel
Strand 6
A
417 424anti-parallel
Strand 7
A
405 407anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il