Analysis of interatomic Contacts of Structural Units in PDB entry:
2BB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BB6 entry

There are 4 chains in PDB entry 2BB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1TRP 414
B
 ASN 1TRP 414
C
 ASN 1TRP 414
D
 ASN 1TRP 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 2BB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
49 67Right-handed alpha
Helix 4
4
A
83 97Right-handed alpha
Helix 5
5
A
102 125Right-handed alpha
Helix 6
6
A
135 148Right-handed alpha
Helix 7
7
A
153 166Right-handed alpha
Helix 8
8
A
176 195Right-handed alpha
Helix 9
9
A
200 218Right-handed alpha
Helix 10
10
A
230 239Right-handed alpha
Helix 11
11
A
245 264Right-handed alpha
Helix 12
12
A
270 282Right-handed alpha
Helix 13
13
A
285 291Right-handed 310
Helix 14
14
A
341 352Right-handed alpha
Helix 15
15
B
9 26Right-handed alpha
Helix 16
16
B
33 43Right-handed alpha
Helix 17
17
B
49 67Right-handed alpha
Helix 18
18
B
83 97Right-handed alpha
Helix 19
19
B
102 125Right-handed alpha
Helix 20
20
B
135 148Right-handed alpha
Helix 21
21
B
153 166Right-handed alpha
Helix 22
22
B
176 195Right-handed alpha
Helix 23
23
B
200 218Right-handed alpha
Helix 24
24
B
230 239Right-handed alpha
Helix 25
25
B
245 264Right-handed alpha
Helix 26
26
B
270 282Right-handed alpha
Helix 27
27
B
285 291Right-handed 310
Helix 28
28
B
341 352Right-handed alpha
Helix 29
29
C
9 26Right-handed alpha
Helix 30
30
C
33 43Right-handed alpha
Helix 31
31
C
49 67Right-handed alpha
Helix 32
32
C
83 97Right-handed alpha
Helix 33
33
C
102 125Right-handed alpha
Helix 34
34
C
135 148Right-handed alpha
Helix 35
35
C
153 166Right-handed alpha
Helix 36
36
C
176 195Right-handed alpha
Helix 37
37
C
200 218Right-handed alpha
Helix 38
38
C
230 239Right-handed alpha
Helix 39
39
C
245 264Right-handed alpha
Helix 40
40
C
270 282Right-handed alpha
Helix 41
41
C
285 291Right-handed 310
Helix 42
42
C
341 352Right-handed alpha
Helix 43
43
D
9 26Right-handed alpha
Helix 44
44
D
33 43Right-handed alpha
Helix 45
45
D
49 67Right-handed alpha
Helix 46
46
D
83 97Right-handed alpha
Helix 47
47
D
102 125Right-handed alpha
Helix 48
48
D
135 148Right-handed alpha
Helix 49
49
D
153 166Right-handed alpha
Helix 50
50
D
176 195Right-handed alpha
Helix 51
51
D
200 218Right-handed alpha
Helix 52
52
D
230 239Right-handed alpha
Helix 53
53
D
245 264Right-handed alpha
Helix 54
54
D
270 282Right-handed alpha
Helix 55
55
D
285 291Right-handed 310
Helix 56
56
D
341 352Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2BB6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 338first strand
Strand 2
A
315 323anti-parallel
Strand 3
A
405 413parallel
Strand 4
A
380 386anti-parallel
Strand 5
A
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 362first strand
Strand 2
A
365 371anti-parallel
Strand 3
A
374 376anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 338first strand
Strand 2
B
315 323anti-parallel
Strand 3
B
405 413parallel
Strand 4
B
380 386anti-parallel
Strand 5
B
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 362first strand
Strand 2
B
365 371anti-parallel
Strand 3
B
374 376anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
330 338first strand
Strand 2
C
315 323anti-parallel
Strand 3
C
405 413parallel
Strand 4
C
380 386anti-parallel
Strand 5
C
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
356 362first strand
Strand 2
C
365 371anti-parallel
Strand 3
C
374 376anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
330 338first strand
Strand 2
D
315 323anti-parallel
Strand 3
D
405 413parallel
Strand 4
D
380 386anti-parallel
Strand 5
D
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
356 362first strand
Strand 2
D
365 371anti-parallel
Strand 3
D
374 376anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il