Analysis of interatomic Contacts of Structural Units in PDB entry:
2BCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BCE entry

There is 1 chain in PDB entry 2BCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PHE 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2BCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
123 125Right-handed 310
Helix 2
2
A
128 134Right-handed alpha
Helix 3
3
A
146 150Right-handed alpha
Helix 4
4
A
156 158Right-handed 310
Helix 5
5
A
162 181Right-handed alpha
Helix 6
6
A
195 205Right-handed alpha
Helix 7
7
A
207 209Right-handed 310
Helix 8
8
A
226 228Right-handed 310
Helix 9
9
A
233 244Right-handed alpha
Helix 10
10
A
251 258Right-handed alpha
Helix 11
11
A
263 268Right-handed alpha
Helix 12
12
A
281 284Right-handed alpha
Helix 13
13
A
300 302Right-handed 310
Helix 14
14
A
304 307Right-handed 310
Helix 15
15
A
322 328Right-handed alpha
Helix 16
16
A
330 332Right-handed 310
Helix 17
17
A
341 371Right-handed alpha
Helix 18
18
A
377 392Right-handed alpha
Helix 19
19
A
394 407Right-handed alpha
Helix 20
20
A
439 442Right-handed alpha
Helix 21
21
A
445 448Right-handed alpha
Helix 22
22
A
450 452Right-handed 310
Helix 23
23
A
455 474Right-handed alpha
Helix 24
24
A
516 523Right-handed alpha
Helix 25
25
A
525 528Right-handed alpha
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There are 3 sheets in PDB entry 2BCE. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
11 14anti-parallel
Strand 3
A
54 56parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
26 34anti-parallel
Strand 3
A
82 89anti-parallel
Strand 4
A
137 141anti-parallel
Strand 5
A
100 103parallel
Strand 6
A
188 193parallel
Strand 7
A
215 219parallel
Strand 8
A
311 317parallel
Strand 9
A
413 418parallel
Strand 10
A
497 501parallel
Strand 11
A
510 512anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
575 577anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il