Analysis of interatomic Contacts of Structural Units in PDB entry:
2BCP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BCP entry

There are 2 chains in PDB entry 2BCP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -16ASP 456
B
 GLY -16ASP 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2BCP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 25Right-handed alpha
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
44 51Right-handed alpha
Helix 4
4
A
64 70Right-handed alpha
Helix 5
5
A
144 155Right-handed alpha
Helix 6
6
A
169 182Right-handed alpha
Helix 7
7
A
201 214Right-handed alpha
Helix 8
8
A
259 263Right-handed 310
Helix 9
9
A
291 294Right-handed 310
Helix 10
10
A
309 325Right-handed alpha
Helix 11
11
A
353 360Right-handed alpha
Helix 12
12
A
409 411Right-handed 310
Helix 13
13
A
412 423Right-handed alpha
Helix 14
14
A
425 431Right-handed alpha
Helix 15
15
A
445 453Right-handed alpha
Helix 16
16
B
10 25Right-handed alpha
Helix 17
17
B
26 28Right-handed 310
Helix 18
18
B
44 51Right-handed alpha
Helix 19
19
B
57 61Right-handed 310
Helix 20
20
B
64 72Right-handed alpha
Helix 21
21
B
144 155Right-handed alpha
Helix 22
22
B
169 182Right-handed alpha
Helix 23
23
B
201 214Right-handed alpha
Helix 24
24
B
259 263Right-handed 310
Helix 25
25
B
291 294Right-handed 310
Helix 26
26
B
309 325Right-handed alpha
Helix 27
27
B
353 360Right-handed alpha
Helix 28
28
B
409 411Right-handed 310
Helix 29
29
B
412 422Right-handed alpha
Helix 30
30
B
425 431Right-handed alpha
Helix 31
31
B
445 453Right-handed alpha
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There are 14 sheets in PDB entry 2BCP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
29 33parallel
Strand 3
A
3 7parallel
Strand 4
A
106 109parallel
Strand 5
A
287 289parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 85first strand
Strand 2
A
90 94anti-parallel
Strand 3
A
99 103anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
255 257anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
248 251parallel
Strand 3
A
162 166parallel
Strand 4
A
185 190parallel
Strand 5
A
218 221parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 229first strand
Strand 2
A
236 239anti-parallel
Strand 3
A
243 245anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
303 305anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 342first strand
Strand 2
A
345 351anti-parallel
Strand 3
A
398 405anti-parallel
Strand 4
A
384 392anti-parallel
Strand 5
A
364 372anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 77first strand
Strand 2
B
29 34parallel
Strand 3
B
3 7parallel
Strand 4
B
106 109parallel
Strand 5
B
287 289parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 85first strand
Strand 2
B
90 95anti-parallel
Strand 3
B
98 103anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 115first strand
Strand 2
B
255 257anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 141first strand
Strand 2
B
248 251parallel
Strand 3
B
162 166parallel
Strand 4
B
185 190parallel
Strand 5
B
218 221parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 229first strand
Strand 2
B
236 239anti-parallel
Strand 3
B
243 244anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 298first strand
Strand 2
B
303 305anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 342first strand
Strand 2
B
345 351anti-parallel
Strand 3
B
398 405anti-parallel
Strand 4
B
384 392anti-parallel
Strand 5
B
364 372anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il