Analysis of interatomic Contacts of Structural Units in PDB entry:
2BEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BEJ entry

There is 1 chain in PDB entry 2BEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5ALA 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2BEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 34Right-handed alpha
Helix 2
2
A
47 53Right-handed alpha
Helix 3
3
A
60 66Right-handed alpha
Helix 4
4
A
88 91Right-handed 310
Helix 5
5
A
92 97Right-handed alpha
Helix 6
6
A
101 107Right-handed alpha
Helix 7
7
A
124 134Right-handed alpha
Helix 8
8
A
146 165Right-handed alpha
Helix 9
9
A
184 198Right-handed alpha
Helix 10
10
A
209 215Right-handed alpha
Helix 11
11
A
216 219Right-handed 310
Helix 12
12
A
221 226Right-handed alpha
Helix 13
13
A
229 249Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 2BEJ.

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
80 83anti-parallel
Strand 3
A
38 42parallel
Strand 4
A
114 118parallel
Strand 5
A
8 11parallel
Strand 6
A
136 142parallel
Strand 7
A
170 177parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il