Analysis of interatomic Contacts of Structural Units in PDB entry:
2BFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BFU entry

There are 2 chains in PDB entry 2BFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 MET 1LEU 369
S
 GLY 1LEU 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 2BFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
L
59 64Right-handed 310
Helix 2
2
S
54 62Right-handed alpha
Helix 3
3
S
127 131Right-handed 310
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There are 6 sheets in PDB entry 2BFU. Click on sheet of interest to get list of strands forming it: LA, LB, LC, SA, SB, SC,

There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
74 75first strand
Strand 2
L
169 170anti-parallel
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There are 2 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
194 196first strand
Strand 2
L
347 348anti-parallel
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There are 2 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
202 203first strand
Strand 2
L
341 342anti-parallel
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There are 2 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
17 18first strand
Strand 2
S
158 159anti-parallel
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There are 2 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
30 33first strand
Strand 2
S
145 148anti-parallel
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There are 2 strands in SC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
73 74first strand
Strand 2
S
118 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il