Analysis of interatomic Contacts of Structural Units in PDB entry:
2BGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BGH entry

There are 2 chains in PDB entry 2BGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4LYS 421
B
 GLN 4LYS 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2BGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 34Right-handed alpha
Helix 2
2
A
55 71Right-handed alpha
Helix 3
3
A
74 79Right-handed 310
Helix 4
4
A
104 110Right-handed alpha
Helix 5
5
A
114 122Right-handed 310
Helix 6
6
A
164 180Right-handed alpha
Helix 7
7
A
191 197Right-handed alpha
Helix 8
8
A
222 233Right-handed alpha
Helix 9
9
A
243 264Right-handed alpha
Helix 10
10
A
279 282Right-handed 310
Helix 11
11
A
309 312Right-handed 310
Helix 12
12
A
313 321Right-handed alpha
Helix 13
13
A
327 341Right-handed alpha
Helix 14
14
A
343 345Right-handed 310
Helix 15
15
A
357 361Right-handed 310
Helix 16
16
A
401 407Right-handed alpha
Helix 17
17
A
408 413Right-handed alpha
Helix 18
18
B
29 35Right-handed alpha
Helix 19
19
B
55 71Right-handed alpha
Helix 20
20
B
74 79Right-handed 310
Helix 21
21
B
104 110Right-handed alpha
Helix 22
22
B
114 122Right-handed 310
Helix 23
23
B
164 180Right-handed alpha
Helix 24
24
B
191 197Right-handed alpha
Helix 25
25
B
222 231Right-handed alpha
Helix 26
26
B
243 264Right-handed alpha
Helix 27
27
B
279 282Right-handed 310
Helix 28
28
B
309 312Right-handed 310
Helix 29
29
B
313 322Right-handed alpha
Helix 30
30
B
327 338Right-handed alpha
Helix 31
31
B
343 345Right-handed 310
Helix 32
32
B
357 361Right-handed 310
Helix 33
33
B
401 405Right-handed alpha
Helix 34
34
B
408 413Right-handed alpha
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There are 5 sheets in PDB entry 2BGH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB,

There are 12 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 372first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
152 159anti-parallel
Strand 4
A
140 146anti-parallel
Strand 5
A
94 101parallel
Strand 6
A
5 14anti-parallel
Strand 7
B
5 13anti-parallel
Strand 8
B
94 101anti-parallel
Strand 9
B
140 146parallel
Strand 10
B
152 159anti-parallel
Strand 11
B
39 46anti-parallel
Strand 12
B
370 372anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
86 88anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 221first strand
Strand 2
A
393 400anti-parallel
Strand 3
A
381 386anti-parallel
Strand 4
A
347 353parallel
Strand 5
A
270 277parallel
Strand 6
A
295 302anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 82first strand
Strand 2
B
86 88anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 221first strand
Strand 2
B
393 400anti-parallel
Strand 3
B
381 386anti-parallel
Strand 4
B
347 352parallel
Strand 5
B
270 277parallel
Strand 6
B
295 302anti-parallel
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