Analysis of interatomic Contacts of Structural Units in PDB entry:
2BGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BGU entry

There is 1 chain in PDB entry 2BGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2BGU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
18 30Right-handed alpha
Helix 2
H1A
A
51 53Right-handed 310
Helix 3
H1B
A
55 58Right-handed 310
Helix 4
H2
A
78 87Right-handed alpha
Helix 5
H3
A
100 103Right-handed alpha
Helix 6
H4
A
124 127Right-handed alpha
Helix 7
H5
A
140 148Right-handed alpha
Helix 8
H6
A
162 165Right-handed alpha
Helix 9
H7
A
196 203Right-handed alpha
Helix 10
H8
A
217 221Right-handed 310
Helix 11
H9
A
243 247Right-handed alpha
Helix 12
H10
A
268 275Right-handed alpha
Helix 13
10A
A
284 287Right-handed 310
Helix 14
10B
A
295 298Right-handed 310
Helix 15
H11
A
303 315Right-handed alpha
Helix 16
H12
A
317 334Right-handed alpha
Helix 17
H13
A
338 348Right-handed alpha
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There are 2 sheets in PDB entry 2BGU. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
36 41parallel
Strand 3
A
1 7parallel
Strand 4
A
61 65parallel
Strand 5
A
94 98parallel
Strand 6
A
132 136parallel
Strand 7
A
155 159parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
210 213parallel
Strand 3
A
182 187parallel
Strand 4
A
250 255parallel
Strand 5
A
279 283parallel
Strand 6
A
299 300parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il