Analysis of interatomic Contacts of Structural Units in PDB entry:
2BGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BGW entry

There are 4 chains in PDB entry 2BGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 11LYS 229
B
 ARG 18TYR 228
C
 G 1 A 15
D
 T 1 C 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2BGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 39Right-handed alpha
Helix 2
2
A
66 76Right-handed alpha
Helix 3
3
A
76 89Right-handed alpha
Helix 4
4
A
102 106Right-handed 310
Helix 5
5
A
108 123Right-handed alpha
Helix 6
6
A
132 148Right-handed alpha
Helix 7
7
A
164 176Right-handed alpha
Helix 8
8
A
181 193Right-handed alpha
Helix 9
9
A
194 199Right-handed alpha
Helix 10
10
A
202 209Right-handed alpha
Helix 11
11
A
213 226Right-handed alpha
Helix 12
12
B
26 28Right-handed 310
Helix 13
13
B
31 38Right-handed alpha
Helix 14
14
B
66 76Right-handed alpha
Helix 15
15
B
76 89Right-handed alpha
Helix 16
16
B
102 106Right-handed 310
Helix 17
17
B
108 124Right-handed alpha
Helix 18
18
B
132 147Right-handed alpha
Helix 19
19
B
165 176Right-handed alpha
Helix 20
20
B
181 193Right-handed alpha
Helix 21
21
B
194 199Right-handed alpha
Helix 22
22
B
202 207Right-handed alpha
Helix 23
23
B
213 226Right-handed alpha
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There are 2 sheets in PDB entry 2BGW. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
20 24parallel
Strand 3
A
53 56anti-parallel
Strand 4
A
59 65anti-parallel
Strand 5
A
91 97parallel
Strand 6
A
126 130parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 46first strand
Strand 2
B
20 24parallel
Strand 3
B
53 54anti-parallel
Strand 4
B
59 65anti-parallel
Strand 5
B
91 97parallel
Strand 6
B
126 130parallel
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