Analysis of interatomic Contacts of Structural Units in PDB entry:
2BH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BH9 entry

There is 1 chain in PDB entry 2BH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 27LEU 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2BH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 47Right-handed alpha
Helix 2
2
A
47 58Right-handed alpha
Helix 3
3
A
76 85Right-handed alpha
Helix 4
4
A
86 88Right-handed 310
Helix 5
5
A
91 93Right-handed 310
Helix 6
6
A
94 104Right-handed alpha
Helix 7
7
A
114 127Right-handed alpha
Helix 8
8
A
146 158Right-handed alpha
Helix 9
9
A
176 188Right-handed alpha
Helix 10
10
A
192 194Right-handed 310
Helix 11
11
A
200 204Right-handed 310
Helix 12
12
A
205 217Right-handed alpha
Helix 13
13
A
218 222Right-handed 310
Helix 14
14
A
246 251Right-handed alpha
Helix 15
15
A
253 259Right-handed alpha
Helix 16
16
A
262 273Right-handed alpha
Helix 17
17
A
280 293Right-handed alpha
Helix 18
18
A
299 301Right-handed 310
Helix 19
19
A
321 325Right-handed 310
Helix 20
20
A
435 447Right-handed alpha
Helix 21
21
A
454 476Right-handed alpha
Helix 22
22
A
489 499Right-handed alpha
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There are 2 sheets in PDB entry 2BH9. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
65 71parallel
Strand 3
A
32 37parallel
Strand 4
A
135 140parallel
Strand 5
A
165 169parallel
Strand 6
A
196 198parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 423first strand
Strand 2
A
399 407anti-parallel
Strand 3
A
389 395anti-parallel
Strand 4
A
366 373anti-parallel
Strand 5
A
230 238anti-parallel
Strand 6
A
353 359parallel
Strand 7
A
337 343anti-parallel
Strand 8
A
303 309anti-parallel
Strand 9
A
480 483parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il