Analysis of interatomic Contacts of Structural Units in PDB entry:
2BJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BJ0 entry

There are 5 chains in PDB entry 2BJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1LYS 203
B
 GLN 1LYS 203
C
 GLN 1LYS 203
D
 GLN 1LYS 203
E
 GLN 1LYS 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2BJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
59 65Right-handed 310
Helix 3
3
A
78 80Right-handed 310
Helix 4
4
B
3 13Right-handed alpha
Helix 5
5
B
59 65Right-handed 310
Helix 6
6
B
78 80Right-handed 310
Helix 7
7
C
3 13Right-handed alpha
Helix 8
8
C
59 65Right-handed 310
Helix 9
9
C
78 80Right-handed 310
Helix 10
10
C
159 163Right-handed 310
Helix 11
11
D
3 13Right-handed alpha
Helix 12
12
D
59 65Right-handed 310
Helix 13
13
D
78 80Right-handed 310
Helix 14
14
E
3 13Right-handed alpha
Helix 15
15
E
59 65Right-handed 310
Helix 16
16
E
78 80Right-handed 310
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There are 13 sheets in PDB entry 2BJ0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, DA, DB, EA, EB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
101 105anti-parallel
Strand 3
A
109 112anti-parallel
Strand 4
A
45 57anti-parallel
Strand 5
A
25 40anti-parallel
Strand 6
A
149 153parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
101 105anti-parallel
Strand 3
A
109 112anti-parallel
Strand 4
A
45 57anti-parallel
Strand 5
A
115 121anti-parallel
Strand 6
A
95 96anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
133 141anti-parallel
Strand 3
A
190 202anti-parallel
Strand 4
A
170 183anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
101 105anti-parallel
Strand 3
B
109 112anti-parallel
Strand 4
B
45 57anti-parallel
Strand 5
B
25 40anti-parallel
Strand 6
B
149 152parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
101 105anti-parallel
Strand 3
B
109 112anti-parallel
Strand 4
B
45 57anti-parallel
Strand 5
B
115 121anti-parallel
Strand 6
B
95 96anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 87first strand
Strand 2
B
133 141anti-parallel
Strand 3
B
191 202anti-parallel
Strand 4
B
170 182anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 76first strand
Strand 2
C
101 105anti-parallel
Strand 3
C
109 112anti-parallel
Strand 4
C
45 57anti-parallel
Strand 5
C
25 40anti-parallel
Strand 6
C
149 153parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 76first strand
Strand 2
C
101 105anti-parallel
Strand 3
C
109 112anti-parallel
Strand 4
C
45 57anti-parallel
Strand 5
C
115 121anti-parallel
Strand 6
C
95 96anti-parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 87first strand
Strand 2
C
133 141anti-parallel
Strand 3
C
191 202anti-parallel
Strand 4
C
170 182anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 76first strand
Strand 2
D
101 105anti-parallel
Strand 3
D
109 112anti-parallel
Strand 4
D
45 57anti-parallel
Strand 5
D
95 96first strand
Strand 6
D
115 121anti-parallel
Strand 7
D
45 57anti-parallel
Strand 8
D
149 152first strand
Strand 9
D
25 40parallel
Strand 10
D
45 57anti-parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
85 87first strand
Strand 2
D
133 141anti-parallel
Strand 3
D
190 202anti-parallel
Strand 4
D
170 183anti-parallel
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There are 10 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 76first strand
Strand 2
E
101 105anti-parallel
Strand 3
E
109 112anti-parallel
Strand 4
E
45 57anti-parallel
Strand 5
E
95 96first strand
Strand 6
E
115 121anti-parallel
Strand 7
E
45 57anti-parallel
Strand 8
E
149 152first strand
Strand 9
E
25 40parallel
Strand 10
E
45 57anti-parallel
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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
85 87first strand
Strand 2
E
133 141anti-parallel
Strand 3
E
190 202anti-parallel
Strand 4
E
170 183anti-parallel
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