Analysis of interatomic Contacts of Structural Units in PDB entry:
2BLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BLE entry

There is 1 chain in PDB entry 2BLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2BLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
60 68Right-handed alpha
Helix 4
4
A
69 71Right-handed 310
Helix 5
5
A
81 92Right-handed alpha
Helix 6
6
A
93 97Right-handed 310
Helix 7
7
A
106 120Right-handed alpha
Helix 8
8
A
135 149Right-handed alpha
Helix 9
9
A
161 171Right-handed alpha
Helix 10
10
A
187 192Right-handed alpha
Helix 11
11
A
197 211Right-handed alpha
Helix 12
12
A
224 235Right-handed alpha
Helix 13
13
A
242 246Right-handed 310
Helix 14
14
A
271 278Right-handed alpha
Helix 15
15
A
300 320Right-handed alpha
Helix 16
16
A
326 331Right-handed alpha
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There are 4 sheets in PDB entry 2BLE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
333 335anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
44 47anti-parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
238 241parallel
Strand 3
A
215 219parallel
Strand 4
A
175 178parallel
Strand 5
A
153 159parallel
Strand 6
A
125 129parallel
Strand 7
A
99 103parallel
Strand 8
A
73 75parallel
Strand 9
A
50 52parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 267first strand
Strand 2
A
292 296anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il