Analysis of interatomic Contacts of Structural Units in PDB entry:
2BM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BM0 entry

There is 1 chain in PDB entry 2BM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2BM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 10Right-handed 310
Helix 2
2
A
24 37Right-handed alpha
Helix 3
3
A
90 101Right-handed alpha
Helix 4
4
A
117 128Right-handed alpha
Helix 5
5
A
145 156Right-handed alpha
Helix 6
6
A
170 174Right-handed 310
Helix 7
7
A
202 204Right-handed 310
Helix 8
8
A
205 221Right-handed alpha
Helix 9
9
A
224 234Right-handed alpha
Helix 10
10
A
238 252Right-handed alpha
Helix 11
11
A
268 280Right-handed alpha
Helix 12
12
A
418 430Right-handed alpha
Helix 13
13
A
430 435Right-handed alpha
Helix 14
14
A
455 468Right-handed alpha
Helix 15
15
A
535 537Right-handed 310
Helix 16
16
A
538 551Right-handed alpha
Helix 17
17
A
578 597Right-handed alpha
Helix 18
18
A
613 615Right-handed 310
Helix 19
19
A
616 627Right-handed alpha
Helix 20
20
A
650 652Right-handed 310
Helix 21
21
A
654 663Right-handed alpha
Helix 22
22
A
680 687Right-handed alpha
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There are 8 sheets in PDB entry 2BM0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
12 19parallel
Strand 4
A
103 108parallel
Strand 5
A
132 136parallel
Strand 6
A
256 260parallel
Strand 7
A
161 163parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
176 179anti-parallel
Strand 3
A
184 188anti-parallel
Strand 4
A
196 199anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
298 301anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 317first strand
Strand 2
A
325 332anti-parallel
Strand 3
A
374 379anti-parallel
Strand 4
A
348 358parallel
Strand 5
A
340 343anti-parallel
Strand 6
A
388 390anti-parallel
Strand 7
A
310 317anti-parallel
Strand 8
A
310 317first strand
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
368 370anti-parallel
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There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 442first strand
Strand 2
A
449 453anti-parallel
Strand 3
A
409 415anti-parallel
Strand 4
A
474 476anti-parallel
Strand 5
A
409 415anti-parallel
Strand 6
A
480 481anti-parallel
Strand 7
A
409 415anti-parallel
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There are 7 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
600 612anti-parallel
Strand 3
A
630 637first strand
Strand 4
A
640 648anti-parallel
Strand 5
A
600 612anti-parallel
Strand 6
A
668 678anti-parallel
Strand 7
A
600 612anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 501first strand
Strand 2
A
504 516anti-parallel
Strand 3
A
563 571anti-parallel
Strand 4
A
523 527parallel
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