Analysis of interatomic Contacts of Structural Units in PDB entry:
2BM8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BM8 entry

There are 12 chains in PDB entry 2BM8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ALA 233
B
 ASN 2ALA 234
C
 ASN 2ALA 233
D
 ASN 2ALA 233
E
 ASN 2ALA 234
F
 ASN 2ALA 234
G
 ASP 3ALA 234
H
 ASN 2ALA 234
I
 ASN 2ALA 233
J
 ASN 2ALA 233
K
 ASP 3ALA 233
L
 ASN 2ALA 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 2BM8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed 310
Helix 2
2
A
39 44Right-handed 310
Helix 3
3
A
66 81Right-handed alpha
Helix 4
4
A
93 106Right-handed alpha
Helix 5
5
A
125 129Right-handed 310
Helix 6
6
A
142 149Right-handed 310
Helix 7
7
A
164 176Right-handed alpha
Helix 8
8
A
188 196Right-handed alpha
Helix 9
9
A
196 206Right-handed alpha
Helix 10
10
B
11 16Right-handed 310
Helix 11
11
B
39 44Right-handed 310
Helix 12
12
B
66 81Right-handed alpha
Helix 13
13
B
93 107Right-handed alpha
Helix 14
14
B
125 129Right-handed 310
Helix 15
15
B
141 145Right-handed 310
Helix 16
16
B
164 176Right-handed alpha
Helix 17
17
B
188 196Right-handed alpha
Helix 18
18
B
196 206Right-handed alpha
Helix 19
19
C
11 16Right-handed 310
Helix 20
20
C
39 44Right-handed 310
Helix 21
21
C
66 81Right-handed alpha
Helix 22
22
C
93 107Right-handed alpha
Helix 23
23
C
125 129Right-handed 310
Helix 24
24
C
142 147Right-handed alpha
Helix 25
25
C
164 176Right-handed alpha
Helix 26
26
C
188 196Right-handed alpha
Helix 27
27
C
196 206Right-handed alpha
Helix 28
28
D
2 7Right-handed 310
Helix 29
29
D
11 16Right-handed 310
Helix 30
30
D
37 44Right-handed 310
Helix 31
31
D
66 81Right-handed alpha
Helix 32
32
D
93 106Right-handed alpha
Helix 33
33
D
125 129Right-handed 310
Helix 34
34
D
142 148Right-handed alpha
Helix 35
35
D
164 176Right-handed alpha
Helix 36
36
D
188 196Right-handed alpha
Helix 37
37
D
196 206Right-handed alpha
Helix 38
38
E
11 16Right-handed 310
Helix 39
39
E
37 44Right-handed 310
Helix 40
40
E
66 81Right-handed alpha
Helix 41
41
E
93 106Right-handed alpha
Helix 42
42
E
118 122Right-handed 310
Helix 43
43
E
125 129Right-handed 310
Helix 44
44
E
142 147Right-handed alpha
Helix 45
45
E
164 176Right-handed alpha
Helix 46
46
E
188 196Right-handed alpha
Helix 47
47
E
196 205Right-handed alpha
Helix 48
48
E
206 208Right-handed 310
Helix 49
49
F
11 16Right-handed 310
Helix 50
50
F
39 44Right-handed 310
Helix 51
51
F
66 81Right-handed alpha
Helix 52
52
F
93 107Right-handed alpha
Helix 53
53
F
125 129Right-handed 310
Helix 54
54
F
141 151Right-handed 310
Helix 55
55
F
164 176Right-handed alpha
Helix 56
56
F
187 196Right-handed alpha
Helix 57
57
F
196 206Right-handed alpha
Helix 58
58
G
11 16Right-handed 310
Helix 59
59
G
39 44Right-handed 310
Helix 60
60
G
66 81Right-handed alpha
Helix 61
61
G
93 106Right-handed alpha
Helix 62
62
G
118 122Right-handed 310
Helix 63
63
G
125 129Right-handed 310
Helix 64
64
G
142 147Right-handed alpha
Helix 65
65
G
164 176Right-handed alpha
Helix 66
66
G
187 196Right-handed alpha
Helix 67
67
G
196 206Right-handed alpha
Helix 68
68
H
11 16Right-handed 310
Helix 69
69
H
39 44Right-handed 310
Helix 70
70
H
66 81Right-handed alpha
Helix 71
71
H
93 106Right-handed alpha
Helix 72
72
H
125 129Right-handed 310
Helix 73
73
H
141 151Right-handed 310
Helix 74
74
H
164 176Right-handed alpha
Helix 75
75
H
188 196Right-handed alpha
Helix 76
76
H
196 206Right-handed alpha
Helix 77
77
I
11 16Right-handed 310
Helix 78
78
I
39 44Right-handed 310
Helix 79
79
I
66 81Right-handed alpha
Helix 80
80
I
93 107Right-handed alpha
Helix 81
81
I
125 129Right-handed 310
Helix 82
82
I
164 176Right-handed alpha
Helix 83
83
I
188 196Right-handed alpha
Helix 84
84
I
196 206Right-handed alpha
Helix 85
85
J
2 7Right-handed 310
Helix 86
86
J
11 16Right-handed 310
Helix 87
87
J
37 44Right-handed 310
Helix 88
88
J
66 81Right-handed alpha
Helix 89
89
J
93 106Right-handed alpha
Helix 90
90
J
125 129Right-handed 310
Helix 91
91
J
143 150Right-handed 310
Helix 92
92
J
164 176Right-handed alpha
Helix 93
93
J
188 196Right-handed alpha
Helix 94
94
J
196 206Right-handed alpha
Helix 95
95
K
11 16Right-handed 310
Helix 96
96
K
39 44Right-handed 310
Helix 97
97
K
66 81Right-handed alpha
Helix 98
98
K
93 107Right-handed alpha
Helix 99
99
K
125 129Right-handed 310
Helix 100
100
K
142 151Right-handed 310
Helix 101
101
K
164 176Right-handed alpha
Helix 102
102
K
188 196Right-handed alpha
Helix 103
103
K
196 206Right-handed alpha
Helix 104
104
L
11 16Right-handed 310
Helix 105
105
L
39 44Right-handed 310
Helix 106
106
L
66 81Right-handed alpha
Helix 107
107
L
93 107Right-handed alpha
Helix 108
108
L
125 129Right-handed 310
Helix 109
109
L
142 147Right-handed alpha
Helix 110
110
L
164 176Right-handed alpha
Helix 111
111
L
188 196Right-handed alpha
Helix 112
112
L
196 206Right-handed alpha
Helix 113
113
L
215 219Right-handed alpha
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There are 24 sheets in PDB entry 2BM8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, CA, CB, CC, A, DB, C, EA, FA, GA, GB, GC, HA, IA, IB, IC, JA, JB, JC, KA, LA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
B
211 214anti-parallel
Strand 3
B
228 231anti-parallel
Strand 4
B
182 185anti-parallel
Strand 5
B
155 159parallel
Strand 6
B
84 88parallel
Strand 7
B
111 116parallel
Strand 8
B
132 136parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
61 62anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
111 116parallel
Strand 3
A
84 88parallel
Strand 4
A
155 159parallel
Strand 5
A
182 185parallel
Strand 6
A
228 231anti-parallel
Strand 7
A
211 214anti-parallel
Strand 8
B
35 37anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 58first strand
Strand 2
B
61 62anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 37first strand
Strand 2
F
211 214anti-parallel
Strand 3
F
228 231anti-parallel
Strand 4
F
182 185anti-parallel
Strand 5
F
155 159parallel
Strand 6
F
84 88parallel
Strand 7
F
111 116parallel
Strand 8
F
132 136parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 58first strand
Strand 2
C
61 62anti-parallel
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There are 8 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 136first strand
Strand 2
C
111 116parallel
Strand 3
C
84 88parallel
Strand 4
C
155 159parallel
Strand 5
C
182 185parallel
Strand 6
C
228 231anti-parallel
Strand 7
C
211 214anti-parallel
Strand 8
F
35 37anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 36first strand
Strand 2
E
212 214anti-parallel
Strand 3
E
228 230anti-parallel
Strand 4
E
182 185anti-parallel
Strand 5
E
155 159parallel
Strand 6
E
84 88parallel
Strand 7
E
111 116parallel
Strand 8
E
132 136parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 58first strand
Strand 2
D
61 62anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
132 136first strand
Strand 2
D
111 116parallel
Strand 3
D
84 88parallel
Strand 4
D
155 159parallel
Strand 5
D
182 185parallel
Strand 6
D
228 231anti-parallel
Strand 7
D
211 214anti-parallel
Strand 8
E
35 36anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 58first strand
Strand 2
E
61 62anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
57 58first strand
Strand 2
F
61 62anti-parallel
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There are 8 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
35 37first strand
Strand 2
H
211 214anti-parallel
Strand 3
H
228 231anti-parallel
Strand 4
H
182 185anti-parallel
Strand 5
H
155 159parallel
Strand 6
H
84 88parallel
Strand 7
H
111 116parallel
Strand 8
H
132 136parallel
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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
56 58first strand
Strand 2
G
61 63anti-parallel
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There are 8 strands in GC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
132 136first strand
Strand 2
G
111 116parallel
Strand 3
G
84 88parallel
Strand 4
G
155 159parallel
Strand 5
G
182 185parallel
Strand 6
G
228 231anti-parallel
Strand 7
G
211 214anti-parallel
Strand 8
H
35 37anti-parallel
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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
56 58first strand
Strand 2
H
61 63anti-parallel
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There are 8 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
35 37first strand
Strand 2
L
212 214anti-parallel
Strand 3
L
228 230anti-parallel
Strand 4
L
182 185anti-parallel
Strand 5
L
155 159parallel
Strand 6
L
84 88parallel
Strand 7
L
111 116parallel
Strand 8
L
132 136parallel
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There are 2 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
57 58first strand
Strand 2
I
61 62anti-parallel
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There are 8 strands in IC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
132 136first strand
Strand 2
I
111 116parallel
Strand 3
I
84 88parallel
Strand 4
I
155 159parallel
Strand 5
I
182 185parallel
Strand 6
I
228 231anti-parallel
Strand 7
I
211 214anti-parallel
Strand 8
L
35 37anti-parallel
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There are 8 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
35 36first strand
Strand 2
K
211 214anti-parallel
Strand 3
K
228 231anti-parallel
Strand 4
K
182 185anti-parallel
Strand 5
K
155 159parallel
Strand 6
K
84 88parallel
Strand 7
K
111 116parallel
Strand 8
K
132 136parallel
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There are 2 strands in JB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
57 58first strand
Strand 2
J
61 62anti-parallel
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There are 8 strands in JC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
132 135first strand
Strand 2
J
111 115parallel
Strand 3
J
84 88parallel
Strand 4
J
155 159parallel
Strand 5
J
182 185parallel
Strand 6
J
228 231anti-parallel
Strand 7
J
211 214anti-parallel
Strand 8
K
35 37anti-parallel
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There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
57 58first strand
Strand 2
K
61 62anti-parallel
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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
57 58first strand
Strand 2
L
61 62anti-parallel
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