Analysis of interatomic Contacts of Structural Units in PDB entry:
2BMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BMX entry

There are 3 chains in PDB entry 2BMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2SER 170
B
 PRO 2ARG 179
C
 PRO 2SER 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2BMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
30 33Right-handed 310
Helix 3
3
A
61 71Right-handed alpha
Helix 4
4
A
71 77Right-handed alpha
Helix 5
5
A
89 100Right-handed alpha
Helix 6
6
A
102 106Right-handed 310
Helix 7
7
A
116 122Right-handed alpha
Helix 8
8
A
157 170Right-handed alpha
Helix 9
9
B
30 33Right-handed 310
Helix 10
10
B
61 71Right-handed alpha
Helix 11
11
B
71 77Right-handed alpha
Helix 12
12
B
89 100Right-handed alpha
Helix 13
13
B
101 104Right-handed 310
Helix 14
14
B
116 122Right-handed alpha
Helix 15
15
B
157 171Right-handed alpha
Helix 16
16
B
174 178Right-handed 310
Helix 17
17
C
22 26Right-handed 310
Helix 18
18
C
30 33Right-handed 310
Helix 19
19
C
61 69Right-handed alpha
Helix 20
20
C
71 77Right-handed alpha
Helix 21
21
C
89 100Right-handed alpha
Helix 22
22
C
116 122Right-handed alpha
Helix 23
23
C
157 169Right-handed alpha
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There are 2 sheets in PDB entry 2BMX. Click on sheet of interest to get list of strands forming it: AA, CA,

There are 14 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
14 18anti-parallel
Strand 3
A
110 112anti-parallel
Strand 4
A
80 86parallel
Strand 5
A
47 52parallel
Strand 6
A
133 138anti-parallel
Strand 7
A
144 150anti-parallel
Strand 8
B
144 150anti-parallel
Strand 9
B
133 138anti-parallel
Strand 10
B
47 52anti-parallel
Strand 11
B
80 86parallel
Strand 12
B
110 112parallel
Strand 13
B
14 18anti-parallel
Strand 14
B
35 39anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 39first strand
Strand 2
C
14 18anti-parallel
Strand 3
C
110 112anti-parallel
Strand 4
C
80 86parallel
Strand 5
C
47 52parallel
Strand 6
C
133 138anti-parallel
Strand 7
C
144 150anti-parallel
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