Analysis of interatomic Contacts of Structural Units in PDB entry:
2BNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BNH entry

There is 1 chain in PDB entry 2BNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2BNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
64 75Right-handed alpha
Helix 4
4
A
94 98Right-handed 310
Helix 5
5
A
100 106Right-handed alpha
Helix 6
6
A
121 133Right-handed alpha
Helix 7
7
A
151 163Right-handed alpha
Helix 8
8
A
178 190Right-handed alpha
Helix 9
9
A
208 220Right-handed alpha
Helix 10
10
A
235 246Right-handed alpha
Helix 11
11
A
265 277Right-handed alpha
Helix 12
12
A
292 304Right-handed alpha
Helix 13
13
A
322 334Right-handed 310
Helix 14
14
A
349 361Right-handed alpha
Helix 15
15
A
379 391Right-handed alpha
Helix 16
16
A
407 417Right-handed alpha
Helix 17
17
A
436 448Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2BNH.

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
55 57parallel
Strand 3
A
84 86parallel
Strand 4
A
112 114parallel
Strand 5
A
141 143parallel
Strand 6
A
169 171parallel
Strand 7
A
198 200parallel
Strand 8
A
226 228parallel
Strand 9
A
255 257parallel
Strand 10
A
283 285parallel
Strand 11
A
312 314parallel
Strand 12
A
340 342parallel
Strand 13
A
369 371parallel
Strand 14
A
397 399parallel
Strand 15
A
426 428parallel
Strand 16
A
453 455parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il