Analysis of interatomic Contacts of Structural Units in PDB entry:
2BO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BO4 entry

There are 6 chains in PDB entry 2BO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASN 382
B
 SER 2GLU 381
C
 SER 2ASN 382
D
 SER 2GLU 381
E
 SER 2GLU 381
F
 SER 2GLU 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are126 helices in PDB entry 2BO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 26Right-handed alpha
Helix 2
2
A
40 58Right-handed alpha
Helix 3
3
A
75 91Right-handed alpha
Helix 4
4
A
107 120Right-handed alpha
Helix 5
5
A
136 142Right-handed alpha
Helix 6
6
A
142 151Right-handed alpha
Helix 7
7
A
155 159Right-handed 310
Helix 8
8
A
171 180Right-handed alpha
Helix 9
9
A
180 185Right-handed alpha
Helix 10
10
A
190 202Right-handed alpha
Helix 11
11
A
222 225Right-handed 310
Helix 12
12
A
226 241Right-handed alpha
Helix 13
13
A
260 265Right-handed alpha
Helix 14
14
A
270 279Right-handed alpha
Helix 15
15
A
283 290Right-handed alpha
Helix 16
16
A
291 293Right-handed 310
Helix 17
17
A
294 304Right-handed alpha
Helix 18
18
A
314 329Right-handed alpha
Helix 19
19
A
333 355Right-handed alpha
Helix 20
20
A
356 358Right-handed 310
Helix 21
21
A
359 381Right-handed alpha
Helix 22
22
B
12 26Right-handed alpha
Helix 23
23
B
40 58Right-handed alpha
Helix 24
24
B
75 91Right-handed alpha
Helix 25
25
B
107 121Right-handed alpha
Helix 26
26
B
136 142Right-handed alpha
Helix 27
27
B
142 151Right-handed alpha
Helix 28
28
B
155 159Right-handed 310
Helix 29
29
B
171 180Right-handed alpha
Helix 30
30
B
180 185Right-handed alpha
Helix 31
31
B
190 202Right-handed alpha
Helix 32
32
B
222 225Right-handed 310
Helix 33
33
B
226 240Right-handed alpha
Helix 34
34
B
260 265Right-handed alpha
Helix 35
35
B
270 278Right-handed alpha
Helix 36
36
B
283 290Right-handed alpha
Helix 37
37
B
291 293Right-handed 310
Helix 38
38
B
294 304Right-handed alpha
Helix 39
39
B
314 329Right-handed alpha
Helix 40
40
B
333 355Right-handed alpha
Helix 41
41
B
356 358Right-handed 310
Helix 42
42
B
359 381Right-handed alpha
Helix 43
43
C
12 26Right-handed alpha
Helix 44
44
C
40 58Right-handed alpha
Helix 45
45
C
75 91Right-handed alpha
Helix 46
46
C
107 119Right-handed alpha
Helix 47
47
C
136 142Right-handed alpha
Helix 48
48
C
142 151Right-handed alpha
Helix 49
49
C
155 159Right-handed 310
Helix 50
50
C
171 180Right-handed alpha
Helix 51
51
C
180 185Right-handed alpha
Helix 52
52
C
190 202Right-handed alpha
Helix 53
53
C
222 225Right-handed 310
Helix 54
54
C
226 241Right-handed alpha
Helix 55
55
C
260 265Right-handed alpha
Helix 56
56
C
270 279Right-handed alpha
Helix 57
57
C
283 290Right-handed alpha
Helix 58
58
C
291 293Right-handed 310
Helix 59
59
C
294 304Right-handed alpha
Helix 60
60
C
314 329Right-handed alpha
Helix 61
61
C
333 355Right-handed alpha
Helix 62
62
C
356 358Right-handed 310
Helix 63
63
C
359 381Right-handed alpha
Helix 64
64
D
12 26Right-handed alpha
Helix 65
65
D
40 58Right-handed alpha
Helix 66
66
D
75 91Right-handed alpha
Helix 67
67
D
107 121Right-handed alpha
Helix 68
68
D
136 142Right-handed alpha
Helix 69
69
D
142 151Right-handed alpha
Helix 70
70
D
155 159Right-handed 310
Helix 71
71
D
171 180Right-handed alpha
Helix 72
72
D
180 185Right-handed alpha
Helix 73
73
D
190 202Right-handed alpha
Helix 74
74
D
222 225Right-handed 310
Helix 75
75
D
226 241Right-handed alpha
Helix 76
76
D
260 265Right-handed alpha
Helix 77
77
D
270 279Right-handed alpha
Helix 78
78
D
283 290Right-handed alpha
Helix 79
79
D
291 293Right-handed 310
Helix 80
80
D
294 304Right-handed alpha
Helix 81
81
D
314 329Right-handed alpha
Helix 82
82
D
333 355Right-handed alpha
Helix 83
83
D
356 358Right-handed 310
Helix 84
84
D
359 381Right-handed alpha
Helix 85
85
E
12 26Right-handed alpha
Helix 86
86
E
40 58Right-handed alpha
Helix 87
87
E
75 91Right-handed alpha
Helix 88
88
E
107 120Right-handed alpha
Helix 89
89
E
136 142Right-handed alpha
Helix 90
90
E
142 151Right-handed alpha
Helix 91
91
E
155 159Right-handed 310
Helix 92
92
E
171 180Right-handed alpha
Helix 93
93
E
180 185Right-handed alpha
Helix 94
94
E
190 202Right-handed alpha
Helix 95
95
E
222 225Right-handed 310
Helix 96
96
E
226 241Right-handed alpha
Helix 97
97
E
260 265Right-handed alpha
Helix 98
98
E
270 279Right-handed alpha
Helix 99
99
E
283 290Right-handed alpha
Helix 100
100
E
291 293Right-handed 310
Helix 101
101
E
294 304Right-handed alpha
Helix 102
102
E
314 329Right-handed alpha
Helix 103
103
E
333 355Right-handed alpha
Helix 104
104
E
356 358Right-handed 310
Helix 105
105
E
359 381Right-handed alpha
Helix 106
106
F
12 26Right-handed alpha
Helix 107
107
F
40 58Right-handed alpha
Helix 108
108
F
75 91Right-handed alpha
Helix 109
109
F
107 121Right-handed alpha
Helix 110
110
F
136 142Right-handed alpha
Helix 111
111
F
142 151Right-handed alpha
Helix 112
112
F
155 159Right-handed 310
Helix 113
113
F
171 180Right-handed alpha
Helix 114
114
F
180 185Right-handed alpha
Helix 115
115
F
190 202Right-handed alpha
Helix 116
116
F
222 225Right-handed 310
Helix 117
117
F
226 241Right-handed alpha
Helix 118
118
F
260 265Right-handed alpha
Helix 119
119
F
270 279Right-handed alpha
Helix 120
120
F
283 290Right-handed alpha
Helix 121
121
F
291 293Right-handed 310
Helix 122
122
F
294 304Right-handed alpha
Helix 123
123
F
314 329Right-handed alpha
Helix 124
124
F
333 355Right-handed alpha
Helix 125
125
F
356 358Right-handed 310
Helix 126
126
F
359 381Right-handed alpha
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There are 6 sheets in PDB entry 2BO4. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
31 36parallel
Strand 3
A
3 7parallel
Strand 4
A
95 98parallel
Strand 5
A
167 170anti-parallel
Strand 6
A
124 128anti-parallel
Strand 7
A
206 210parallel
Strand 8
A
251 253parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 65first strand
Strand 2
B
31 36parallel
Strand 3
B
3 8parallel
Strand 4
B
95 98parallel
Strand 5
B
167 170anti-parallel
Strand 6
B
124 128anti-parallel
Strand 7
B
206 210parallel
Strand 8
B
251 253parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 65first strand
Strand 2
C
31 36parallel
Strand 3
C
3 7parallel
Strand 4
C
95 98parallel
Strand 5
C
167 170anti-parallel
Strand 6
C
124 128anti-parallel
Strand 7
C
206 210parallel
Strand 8
C
251 253parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 65first strand
Strand 2
D
31 36parallel
Strand 3
D
3 8parallel
Strand 4
D
95 98parallel
Strand 5
D
167 170anti-parallel
Strand 6
D
124 128anti-parallel
Strand 7
D
206 210parallel
Strand 8
D
251 253parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
61 65first strand
Strand 2
E
31 36parallel
Strand 3
E
3 7parallel
Strand 4
E
95 98parallel
Strand 5
E
167 170anti-parallel
Strand 6
E
124 128anti-parallel
Strand 7
E
206 210parallel
Strand 8
E
251 253parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 65first strand
Strand 2
F
31 36parallel
Strand 3
F
3 8parallel
Strand 4
F
95 98parallel
Strand 5
F
167 170anti-parallel
Strand 6
F
124 128anti-parallel
Strand 7
F
206 210parallel
Strand 8
F
251 253parallel
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