Analysis of interatomic Contacts of Structural Units in PDB entry:
2BO8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2BO8 entry

There are 10 chains in PDB entry 2BO8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ASN 382
B	SER 2	ASN 382
C	SER 2	ASN 382
D	SER 2	ASN 382
E	SER 2	ASN 382
F	SER 2	ASN 382
G	SER 2	ASN 382
H	SER 2	ASN 382
I	SER 2	ASN 382
J	SER 2	ASN 382

There are210 helices in PDB entry 2BO8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	12	26	Right-handed alpha
Helix 2	2	A	40	58	Right-handed alpha
Helix 3	3	A	75	91	Right-handed alpha
Helix 4	4	A	107	121	Right-handed alpha
Helix 5	5	A	136	142	Right-handed alpha
Helix 6	6	A	142	151	Right-handed alpha
Helix 7	7	A	155	159	Right-handed 310
Helix 8	8	A	171	180	Right-handed alpha
Helix 9	9	A	180	186	Right-handed alpha
Helix 10	10	A	190	202	Right-handed alpha
Helix 11	11	A	222	225	Right-handed 310
Helix 12	12	A	226	240	Right-handed alpha
Helix 13	13	A	260	265	Right-handed alpha
Helix 14	14	A	270	278	Right-handed alpha
Helix 15	15	A	283	290	Right-handed alpha
Helix 16	16	A	291	293	Right-handed 310
Helix 17	17	A	294	304	Right-handed alpha
Helix 18	18	A	314	329	Right-handed alpha
Helix 19	19	A	333	355	Right-handed alpha
Helix 20	20	A	356	358	Right-handed 310
Helix 21	21	A	359	381	Right-handed alpha
Helix 22	22	B	12	26	Right-handed alpha
Helix 23	23	B	40	58	Right-handed alpha
Helix 24	24	B	75	91	Right-handed alpha
Helix 25	25	B	107	121	Right-handed alpha
Helix 26	26	B	136	142	Right-handed alpha
Helix 27	27	B	142	151	Right-handed alpha
Helix 28	28	B	155	159	Right-handed 310
Helix 29	29	B	171	180	Right-handed alpha
Helix 30	30	B	180	185	Right-handed alpha
Helix 31	31	B	190	202	Right-handed alpha
Helix 32	32	B	222	225	Right-handed 310
Helix 33	33	B	226	241	Right-handed alpha
Helix 34	34	B	260	265	Right-handed alpha
Helix 35	35	B	270	278	Right-handed alpha
Helix 36	36	B	283	290	Right-handed alpha
Helix 37	37	B	291	293	Right-handed 310
Helix 38	38	B	294	304	Right-handed alpha
Helix 39	39	B	314	329	Right-handed alpha
Helix 40	40	B	333	355	Right-handed alpha
Helix 41	41	B	356	358	Right-handed 310
Helix 42	42	B	359	381	Right-handed alpha
Helix 43	43	C	12	26	Right-handed alpha
Helix 44	44	C	40	58	Right-handed alpha
Helix 45	45	C	75	91	Right-handed alpha
Helix 46	46	C	107	121	Right-handed alpha
Helix 47	47	C	136	142	Right-handed alpha
Helix 48	48	C	142	151	Right-handed alpha
Helix 49	49	C	155	159	Right-handed 310
Helix 50	50	C	171	180	Right-handed alpha
Helix 51	51	C	180	185	Right-handed alpha
Helix 52	52	C	190	202	Right-handed alpha
Helix 53	53	C	222	225	Right-handed 310
Helix 54	54	C	226	240	Right-handed alpha
Helix 55	55	C	260	265	Right-handed alpha
Helix 56	56	C	270	279	Right-handed alpha
Helix 57	57	C	283	290	Right-handed alpha
Helix 58	58	C	291	293	Right-handed 310
Helix 59	59	C	294	304	Right-handed alpha
Helix 60	60	C	314	329	Right-handed alpha
Helix 61	61	C	333	355	Right-handed alpha
Helix 62	62	C	356	358	Right-handed 310
Helix 63	63	C	359	381	Right-handed alpha
Helix 64	64	D	12	26	Right-handed alpha
Helix 65	65	D	40	58	Right-handed alpha
Helix 66	66	D	75	91	Right-handed alpha
Helix 67	67	D	107	120	Right-handed alpha
Helix 68	68	D	136	142	Right-handed alpha
Helix 69	69	D	142	151	Right-handed alpha
Helix 70	70	D	155	159	Right-handed 310
Helix 71	71	D	171	180	Right-handed alpha
Helix 72	72	D	180	186	Right-handed alpha
Helix 73	73	D	190	202	Right-handed alpha
Helix 74	74	D	222	225	Right-handed 310
Helix 75	75	D	226	240	Right-handed alpha
Helix 76	76	D	260	265	Right-handed alpha
Helix 77	77	D	270	278	Right-handed alpha
Helix 78	78	D	283	290	Right-handed alpha
Helix 79	79	D	291	293	Right-handed 310
Helix 80	80	D	294	304	Right-handed alpha
Helix 81	81	D	314	329	Right-handed alpha
Helix 82	82	D	333	355	Right-handed alpha
Helix 83	83	D	356	358	Right-handed 310
Helix 84	84	D	359	381	Right-handed alpha
Helix 85	85	E	12	26	Right-handed alpha
Helix 86	86	E	40	58	Right-handed alpha
Helix 87	87	E	75	91	Right-handed alpha
Helix 88	88	E	107	121	Right-handed alpha
Helix 89	89	E	136	142	Right-handed alpha
Helix 90	90	E	142	151	Right-handed alpha
Helix 91	91	E	155	159	Right-handed 310
Helix 92	92	E	171	180	Right-handed alpha
Helix 93	93	E	180	186	Right-handed alpha
Helix 94	94	E	190	202	Right-handed alpha
Helix 95	95	E	222	225	Right-handed 310
Helix 96	96	E	226	241	Right-handed alpha
Helix 97	97	E	260	265	Right-handed alpha
Helix 98	98	E	270	278	Right-handed alpha
Helix 99	99	E	283	290	Right-handed alpha
Helix 100	100	E	291	293	Right-handed 310
Helix 101	101	E	294	304	Right-handed alpha
Helix 102	102	E	314	329	Right-handed alpha
Helix 103	103	E	333	355	Right-handed alpha
Helix 104	104	E	356	358	Right-handed 310
Helix 105	105	E	359	381	Right-handed alpha
Helix 106	106	F	12	26	Right-handed alpha
Helix 107	107	F	40	58	Right-handed alpha
Helix 108	108	F	75	91	Right-handed alpha
Helix 109	109	F	107	121	Right-handed alpha
Helix 110	110	F	136	142	Right-handed alpha
Helix 111	111	F	142	151	Right-handed alpha
Helix 112	112	F	155	159	Right-handed 310
Helix 113	113	F	171	180	Right-handed alpha
Helix 114	114	F	180	185	Right-handed alpha
Helix 115	115	F	190	202	Right-handed alpha
Helix 116	116	F	222	225	Right-handed 310
Helix 117	117	F	226	241	Right-handed alpha
Helix 118	118	F	260	265	Right-handed alpha
Helix 119	119	F	270	278	Right-handed alpha
Helix 120	120	F	283	290	Right-handed alpha
Helix 121	121	F	291	293	Right-handed 310
Helix 122	122	F	294	304	Right-handed alpha
Helix 123	123	F	314	329	Right-handed alpha
Helix 124	124	F	333	355	Right-handed alpha
Helix 125	125	F	356	358	Right-handed 310
Helix 126	126	F	359	381	Right-handed alpha
Helix 127	127	G	12	26	Right-handed alpha
Helix 128	128	G	40	58	Right-handed alpha
Helix 129	129	G	75	91	Right-handed alpha
Helix 130	130	G	107	121	Right-handed alpha
Helix 131	131	G	136	142	Right-handed alpha
Helix 132	132	G	142	151	Right-handed alpha
Helix 133	133	G	155	159	Right-handed 310
Helix 134	134	G	171	180	Right-handed alpha
Helix 135	135	G	180	186	Right-handed alpha
Helix 136	136	G	190	202	Right-handed alpha
Helix 137	137	G	222	225	Right-handed 310
Helix 138	138	G	226	240	Right-handed alpha
Helix 139	139	G	260	265	Right-handed alpha
Helix 140	140	G	270	278	Right-handed alpha
Helix 141	141	G	283	290	Right-handed alpha
Helix 142	142	G	291	293	Right-handed 310
Helix 143	143	G	294	304	Right-handed alpha
Helix 144	144	G	314	329	Right-handed alpha
Helix 145	145	G	333	355	Right-handed alpha
Helix 146	146	G	356	358	Right-handed 310
Helix 147	147	G	359	381	Right-handed alpha
Helix 148	148	H	12	26	Right-handed alpha
Helix 149	149	H	40	58	Right-handed alpha
Helix 150	150	H	75	91	Right-handed alpha
Helix 151	151	H	107	121	Right-handed alpha
Helix 152	152	H	136	142	Right-handed alpha
Helix 153	153	H	142	151	Right-handed alpha
Helix 154	154	H	155	159	Right-handed 310
Helix 155	155	H	171	180	Right-handed alpha
Helix 156	156	H	180	186	Right-handed alpha
Helix 157	157	H	190	202	Right-handed alpha
Helix 158	158	H	222	225	Right-handed 310
Helix 159	159	H	226	241	Right-handed alpha
Helix 160	160	H	260	265	Right-handed alpha
Helix 161	161	H	270	279	Right-handed alpha
Helix 162	162	H	283	290	Right-handed alpha
Helix 163	163	H	291	293	Right-handed 310
Helix 164	164	H	294	304	Right-handed alpha
Helix 165	165	H	314	329	Right-handed alpha
Helix 166	166	H	333	355	Right-handed alpha
Helix 167	167	H	356	358	Right-handed 310
Helix 168	168	H	359	381	Right-handed alpha
Helix 169	169	I	12	26	Right-handed alpha
Helix 170	170	I	40	58	Right-handed alpha
Helix 171	171	I	75	91	Right-handed alpha
Helix 172	172	I	107	121	Right-handed alpha
Helix 173	173	I	136	142	Right-handed alpha
Helix 174	174	I	142	151	Right-handed alpha
Helix 175	175	I	155	159	Right-handed 310
Helix 176	176	I	171	180	Right-handed alpha
Helix 177	177	I	180	185	Right-handed alpha
Helix 178	178	I	190	202	Right-handed alpha
Helix 179	179	I	222	225	Right-handed 310
Helix 180	180	I	226	241	Right-handed alpha
Helix 181	181	I	260	265	Right-handed alpha
Helix 182	182	I	270	279	Right-handed alpha
Helix 183	183	I	283	290	Right-handed alpha
Helix 184	184	I	291	293	Right-handed 310
Helix 185	185	I	294	304	Right-handed alpha
Helix 186	186	I	314	329	Right-handed alpha
Helix 187	187	I	333	355	Right-handed alpha
Helix 188	188	I	356	358	Right-handed 310
Helix 189	189	I	359	381	Right-handed alpha
Helix 190	190	J	12	26	Right-handed alpha
Helix 191	191	J	40	58	Right-handed alpha
Helix 192	192	J	75	91	Right-handed alpha
Helix 193	193	J	107	121	Right-handed alpha
Helix 194	194	J	136	142	Right-handed alpha
Helix 195	195	J	142	151	Right-handed alpha
Helix 196	196	J	155	159	Right-handed 310
Helix 197	197	J	171	180	Right-handed alpha
Helix 198	198	J	180	186	Right-handed alpha
Helix 199	199	J	190	202	Right-handed alpha
Helix 200	200	J	222	225	Right-handed 310
Helix 201	201	J	226	240	Right-handed alpha
Helix 202	202	J	260	265	Right-handed alpha
Helix 203	203	J	270	278	Right-handed alpha
Helix 204	204	J	283	290	Right-handed alpha
Helix 205	205	J	291	293	Right-handed 310
Helix 206	206	J	294	304	Right-handed alpha
Helix 207	207	J	314	329	Right-handed alpha
Helix 208	208	J	333	355	Right-handed alpha
Helix 209	209	J	356	358	Right-handed 310
Helix 210	210	J	359	381	Right-handed alpha

There are 10 sheets in PDB entry 2BO8. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA, IA, JA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	31	36	parallel
Strand 3	A	3	8	parallel
Strand 4	A	95	98	parallel
Strand 5	A	167	170	anti-parallel
Strand 6	A	124	128	anti-parallel
Strand 7	A	206	210	parallel
Strand 8	A	251	253	parallel

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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	31	36	parallel
Strand 3	B	3	8	parallel
Strand 4	B	95	98	parallel
Strand 5	B	167	170	anti-parallel
Strand 6	B	124	128	anti-parallel
Strand 7	B	206	210	parallel
Strand 8	B	251	253	parallel

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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	65	first strand
Strand 2	C	31	36	parallel
Strand 3	C	3	8	parallel
Strand 4	C	95	98	parallel
Strand 5	C	167	170	anti-parallel
Strand 6	C	124	128	anti-parallel
Strand 7	C	206	210	parallel
Strand 8	C	251	253	parallel

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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	65	first strand
Strand 2	D	31	36	parallel
Strand 3	D	3	8	parallel
Strand 4	D	95	98	parallel
Strand 5	D	167	170	anti-parallel
Strand 6	D	124	128	anti-parallel
Strand 7	D	206	210	parallel
Strand 8	D	251	253	parallel

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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	65	first strand
Strand 2	E	31	36	parallel
Strand 3	E	3	8	parallel
Strand 4	E	95	98	parallel
Strand 5	E	167	170	anti-parallel
Strand 6	E	124	128	anti-parallel
Strand 7	E	206	210	parallel
Strand 8	E	251	253	parallel

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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	65	first strand
Strand 2	F	31	36	parallel
Strand 3	F	3	8	parallel
Strand 4	F	95	98	parallel
Strand 5	F	167	170	anti-parallel
Strand 6	F	124	128	anti-parallel
Strand 7	F	206	210	parallel
Strand 8	F	251	253	parallel

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There are 8 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	61	65	first strand
Strand 2	G	31	36	parallel
Strand 3	G	3	8	parallel
Strand 4	G	95	98	parallel
Strand 5	G	167	170	anti-parallel
Strand 6	G	124	128	anti-parallel
Strand 7	G	206	210	parallel
Strand 8	G	251	253	parallel

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There are 8 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	61	65	first strand
Strand 2	H	31	36	parallel
Strand 3	H	3	8	parallel
Strand 4	H	95	98	parallel
Strand 5	H	167	170	anti-parallel
Strand 6	H	124	128	anti-parallel
Strand 7	H	206	210	parallel
Strand 8	H	251	253	parallel

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There are 8 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	61	65	first strand
Strand 2	I	31	36	parallel
Strand 3	I	3	8	parallel
Strand 4	I	95	98	parallel
Strand 5	I	167	170	anti-parallel
Strand 6	I	124	128	anti-parallel
Strand 7	I	206	210	parallel
Strand 8	I	251	253	parallel

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There are 8 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	61	65	first strand
Strand 2	J	31	36	parallel
Strand 3	J	3	8	parallel
Strand 4	J	95	98	parallel
Strand 5	J	167	170	anti-parallel
Strand 6	J	124	128	anti-parallel
Strand 7	J	206	210	parallel
Strand 8	J	251	253	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2BO8

Analysis of interatomic Contacts of Structural Units in PDB entry:
2BO8