Analysis of interatomic Contacts of Structural Units in PDB entry:
2BPS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BPS entry

There are 2 chains in PDB entry 2BPS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LEU 79
B
 HIS -1LEU 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2BPS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 38Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
B
28 38Right-handed alpha
Helix 5
5
B
65 69Right-handed 310
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There is 1 sheet ( AA) in PDB entry 2BPS.

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
49 52anti-parallel
Strand 3
A
75 78anti-parallel
Strand 4
A
2 8parallel
Strand 5
A
16 22anti-parallel
Strand 6
B
57 59parallel
Strand 7
B
50 52anti-parallel
Strand 8
B
75 78anti-parallel
Strand 9
B
2 8parallel
Strand 10
B
16 22anti-parallel
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