Analysis of interatomic Contacts of Structural Units in PDB entry:
2BRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BRJ entry

There are 3 chains in PDB entry 2BRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 15ASN 188
B
 LYS 15ASN 188
C
 LYS 15ASN 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2BRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
78 81Right-handed 310
Helix 2
2
A
154 158Right-handed 310
Helix 3
3
A
171 176Right-handed alpha
Helix 4
4
A
178 181Right-handed 310
Helix 5
5
B
78 81Right-handed 310
Helix 6
6
B
154 158Right-handed 310
Helix 7
7
B
171 176Right-handed alpha
Helix 8
8
B
178 181Right-handed 310
Helix 9
9
C
78 81Right-handed 310
Helix 10
10
C
154 158Right-handed 310
Helix 11
11
C
171 176Right-handed alpha
Helix 12
12
C
178 181Right-handed 310
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There are 3 sheets in PDB entry 2BRJ. Click on sheet of interest to get list of strands forming it: AA, BA, CA,

There are 24 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 24first strand
Strand 2
A
139 147anti-parallel
Strand 3
A
126 135anti-parallel
Strand 4
A
111 120anti-parallel
Strand 5
A
97 106anti-parallel
Strand 6
A
82 92anti-parallel
Strand 7
A
63 77anti-parallel
Strand 8
A
48 51anti-parallel
Strand 9
A
48 51first strand
Strand 10
A
63 77anti-parallel
Strand 11
A
54 57anti-parallel
Strand 12
A
17 24anti-parallel
Strand 13
A
63 77first strand
Strand 14
A
48 51anti-parallel
Strand 15
A
82 92first strand
Strand 16
A
63 77anti-parallel
Strand 17
A
97 106first strand
Strand 18
A
82 92anti-parallel
Strand 19
A
111 120first strand
Strand 20
A
97 106anti-parallel
Strand 21
A
126 135first strand
Strand 22
A
111 120anti-parallel
Strand 23
A
139 147first strand
Strand 24
A
17 24anti-parallel
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There are 18 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 24first strand
Strand 2
B
139 147anti-parallel
Strand 3
B
48 51first strand
Strand 4
B
63 77anti-parallel
Strand 5
B
54 57anti-parallel
Strand 6
B
17 24anti-parallel
Strand 7
B
63 77first strand
Strand 8
B
48 51anti-parallel
Strand 9
B
82 92first strand
Strand 10
B
63 77anti-parallel
Strand 11
B
97 106first strand
Strand 12
B
82 92anti-parallel
Strand 13
B
111 120first strand
Strand 14
B
97 106anti-parallel
Strand 15
B
126 135first strand
Strand 16
B
111 120anti-parallel
Strand 17
B
139 147first strand
Strand 18
B
17 24anti-parallel
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There are 18 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 24first strand
Strand 2
C
139 147anti-parallel
Strand 3
C
48 51first strand
Strand 4
C
63 77anti-parallel
Strand 5
C
54 57anti-parallel
Strand 6
C
17 24anti-parallel
Strand 7
C
63 77first strand
Strand 8
C
48 51anti-parallel
Strand 9
C
82 92first strand
Strand 10
C
63 77anti-parallel
Strand 11
C
97 106first strand
Strand 12
C
82 92anti-parallel
Strand 13
C
111 120first strand
Strand 14
C
97 106anti-parallel
Strand 15
C
126 135first strand
Strand 16
C
111 120anti-parallel
Strand 17
C
139 147first strand
Strand 18
C
17 24anti-parallel
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