Analysis of interatomic Contacts of Structural Units in PDB entry:
2BRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BRV entry

There is 1 chain in PDB entry 2BRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 VAL 170GLU 891
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2BRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
172 177Right-handed alpha
Helix 2
2
X
177 186Right-handed alpha
Helix 3
3
X
197 214Right-handed alpha
Helix 4
4
X
235 253Right-handed alpha
Helix 5
5
X
262 280Right-handed alpha
Helix 6
6
X
290 296Right-handed alpha
Helix 7
7
X
298 309Right-handed alpha
Helix 8
8
X
314 329Right-handed alpha
Helix 9
9
X
346 349Right-handed 310
Helix 10
10
X
350 365Right-handed alpha
Helix 11
11
X
366 378Right-handed alpha
Helix 12
12
X
379 382Right-handed 310
Helix 13
13
X
407 426Right-handed alpha
Helix 14
14
X
433 435Right-handed 310
Helix 15
15
X
436 445Right-handed alpha
Helix 16
16
X
446 448Right-handed 310
Helix 17
17
X
462 466Right-handed 310
Helix 18
18
X
466 470Right-handed 310
Helix 19
19
X
475 488Right-handed alpha
Helix 20
20
X
491 507Right-handed alpha
Helix 21
21
X
512 517Right-handed 310
Helix 22
22
X
519 532Right-handed alpha
Helix 23
23
X
607 612Right-handed alpha
Helix 24
24
X
737 740Right-handed 310
Helix 25
25
X
762 766Right-handed 310
Helix 26
26
X
802 811Right-handed alpha
Helix 27
27
X
882 887Right-handed alpha
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There are 7 sheets in PDB entry 2BRV. Click on sheet of interest to get list of strands forming it: XA, XB, XC, XD, XE, XF, XG,

There are 3 strands in XA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
389 390first strand
Strand 2
X
396 398anti-parallel
Strand 3
X
402 403anti-parallel
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There are 2 strands in XB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
450 451first strand
Strand 2
X
454 455anti-parallel
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There are 4 strands in XC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
543 547first strand
Strand 2
X
552 556anti-parallel
Strand 3
X
563 567anti-parallel
Strand 4
X
593 597anti-parallel
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There are 5 strands in XD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
621 622first strand
Strand 2
X
693 700anti-parallel
Strand 3
X
775 785anti-parallel
Strand 4
X
752 761anti-parallel
Strand 5
X
723 725anti-parallel
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There are 9 strands in XE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
641 647first strand
Strand 2
X
650 656anti-parallel
Strand 3
X
667 673anti-parallel
Strand 4
X
677 680anti-parallel
Strand 5
X
795 799anti-parallel
Strand 6
X
742 746anti-parallel
Strand 7
X
731 734anti-parallel
Strand 8
X
708 711anti-parallel
Strand 9
X
714 715anti-parallel
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There are 5 strands in XF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
817 821first strand
Strand 2
X
824 829anti-parallel
Strand 3
X
834 839anti-parallel
Strand 4
X
857 863anti-parallel
Strand 5
X
868 873anti-parallel
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There are 2 strands in XG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
845 847first strand
Strand 2
X
851 853anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il