Analysis of interatomic Contacts of Structural Units in PDB entry:
2BSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BSX entry

There is 1 chain in PDB entry 2BSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLU 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2BSX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
25 33Right-handed alpha
Helix 2
2
A
67 82Right-handed alpha
Helix 3
3
A
131 145Right-handed alpha
Helix 4
4
A
169 176Right-handed alpha
Helix 5
5
A
184 196Right-handed alpha
Helix 6
6
A
208 212Right-handed 310
Helix 7
7
A
221 242Right-handed alpha
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There are 2 sheets in PDB entry 2BSX. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
37 44first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
18 22parallel
Strand 5
A
85 94parallel
Strand 6
A
198 207parallel
Strand 7
A
105 112anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
37 44first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
18 22parallel
Strand 5
A
85 94parallel
Strand 6
A
180 182anti-parallel
Strand 7
A
150 156parallel
Strand 8
A
105 112parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il