Analysis of interatomic Contacts of Structural Units in PDB entry:
2BVH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2BVH entry

There are 4 chains in PDB entry 2BVH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 5	GLU 457
B	LYS 5	GLU 457
C	LYS 5	GLU 457
D	LYS 5	GLU 457

There are 72 helices in PDB entry 2BVH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	28	Right-handed alpha
Helix 2	2	A	47	61	Right-handed alpha
Helix 3	3	A	110	120	Right-handed alpha
Helix 4	4	A	134	140	Right-handed alpha
Helix 5	5	A	147	152	Right-handed alpha
Helix 6	6	A	153	156	Right-handed 310
Helix 7	7	A	178	189	Right-handed alpha
Helix 8	8	A	190	192	Right-handed 310
Helix 9	9	A	219	237	Right-handed alpha
Helix 10	10	A	266	279	Right-handed alpha
Helix 11	11	A	292	297	Right-handed alpha
Helix 12	12	A	298	304	Right-handed alpha
Helix 13	13	A	322	332	Right-handed alpha
Helix 14	14	A	333	337	Right-handed 310
Helix 15	15	A	386	402	Right-handed alpha
Helix 16	16	A	411	415	Right-handed 310
Helix 17	17	A	419	428	Right-handed alpha
Helix 18	18	A	428	443	Right-handed alpha
Helix 19	19	B	23	28	Right-handed alpha
Helix 20	20	B	47	61	Right-handed alpha
Helix 21	21	B	110	120	Right-handed alpha
Helix 22	22	B	134	140	Right-handed alpha
Helix 23	23	B	147	152	Right-handed alpha
Helix 24	24	B	153	156	Right-handed 310
Helix 25	25	B	178	189	Right-handed alpha
Helix 26	26	B	190	192	Right-handed 310
Helix 27	27	B	219	237	Right-handed alpha
Helix 28	28	B	266	279	Right-handed alpha
Helix 29	29	B	292	297	Right-handed alpha
Helix 30	30	B	298	304	Right-handed alpha
Helix 31	31	B	322	332	Right-handed alpha
Helix 32	32	B	333	337	Right-handed 310
Helix 33	33	B	386	402	Right-handed alpha
Helix 34	34	B	411	415	Right-handed 310
Helix 35	35	B	419	428	Right-handed alpha
Helix 36	36	B	428	443	Right-handed alpha
Helix 37	37	C	23	28	Right-handed alpha
Helix 38	38	C	47	61	Right-handed alpha
Helix 39	39	C	110	120	Right-handed alpha
Helix 40	40	C	134	140	Right-handed alpha
Helix 41	41	C	147	152	Right-handed alpha
Helix 42	42	C	153	156	Right-handed 310
Helix 43	43	C	178	189	Right-handed alpha
Helix 44	44	C	190	192	Right-handed 310
Helix 45	45	C	219	237	Right-handed alpha
Helix 46	46	C	266	279	Right-handed alpha
Helix 47	47	C	292	297	Right-handed alpha
Helix 48	48	C	298	304	Right-handed alpha
Helix 49	49	C	322	332	Right-handed alpha
Helix 50	50	C	333	337	Right-handed 310
Helix 51	51	C	386	402	Right-handed alpha
Helix 52	52	C	411	415	Right-handed 310
Helix 53	53	C	419	428	Right-handed alpha
Helix 54	54	C	428	443	Right-handed alpha
Helix 55	55	D	23	28	Right-handed alpha
Helix 56	56	D	47	61	Right-handed alpha
Helix 57	57	D	110	120	Right-handed alpha
Helix 58	58	D	134	140	Right-handed alpha
Helix 59	59	D	147	152	Right-handed alpha
Helix 60	60	D	153	156	Right-handed 310
Helix 61	61	D	178	189	Right-handed alpha
Helix 62	62	D	190	192	Right-handed 310
Helix 63	63	D	219	237	Right-handed alpha
Helix 64	64	D	266	279	Right-handed alpha
Helix 65	65	D	292	297	Right-handed alpha
Helix 66	66	D	298	304	Right-handed alpha
Helix 67	67	D	322	332	Right-handed alpha
Helix 68	68	D	333	337	Right-handed 310
Helix 69	69	D	386	402	Right-handed alpha
Helix 70	70	D	411	415	Right-handed 310
Helix 71	71	D	419	428	Right-handed alpha
Helix 72	72	D	428	443	Right-handed alpha

There are 23 sheets in PDB entry 2BVH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, CF, A, DB, C, DD, DE,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	17	first strand
Strand 2	A	41	44	anti-parallel
Strand 3	A	84	87	parallel
Strand 4	A	65	68	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	97	first strand
Strand 2	A	102	106	anti-parallel
Strand 3	A	194	201	anti-parallel
Strand 4	A	158	164	anti-parallel
Strand 5	A	170	174	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	124	first strand
Strand 2	A	203	204	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	283	286	first strand
Strand 2	A	209	216	anti-parallel
Strand 3	A	289	291	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	283	286	first strand
Strand 2	A	209	216	anti-parallel
Strand 3	A	255	263	anti-parallel
Strand 4	A	244	249	anti-parallel
Strand 5	A	349	352	anti-parallel
Strand 6	A	371	374	anti-parallel
Strand 7	A	315	319	anti-parallel
Strand 8	A	405	409	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	312	first strand
Strand 2	A	377	378	anti-parallel
Strand 3	A	345	347	anti-parallel
Strand 4	A	338	340	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	17	first strand
Strand 2	B	41	44	anti-parallel
Strand 3	B	84	87	parallel
Strand 4	B	65	68	parallel

Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	97	first strand
Strand 2	B	102	106	anti-parallel
Strand 3	B	194	201	anti-parallel
Strand 4	B	158	164	anti-parallel
Strand 5	B	170	174	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	124	first strand
Strand 2	B	203	204	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	286	first strand
Strand 2	B	209	216	anti-parallel
Strand 3	B	289	291	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	286	first strand
Strand 2	B	209	216	anti-parallel
Strand 3	B	255	263	anti-parallel
Strand 4	B	244	249	anti-parallel
Strand 5	B	349	352	anti-parallel
Strand 6	B	371	374	anti-parallel
Strand 7	B	315	319	anti-parallel
Strand 8	B	405	409	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	312	first strand
Strand 2	B	377	378	anti-parallel
Strand 3	B	345	347	anti-parallel
Strand 4	B	338	340	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	17	first strand
Strand 2	C	41	44	anti-parallel
Strand 3	C	84	87	parallel
Strand 4	C	65	68	parallel

Back to list of sheets
Back to top of page

There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	97	first strand
Strand 2	C	102	106	anti-parallel
Strand 3	C	194	201	anti-parallel
Strand 4	C	158	164	anti-parallel
Strand 5	C	170	174	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	124	first strand
Strand 2	C	203	204	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	286	first strand
Strand 2	C	209	216	anti-parallel
Strand 3	C	289	291	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	286	first strand
Strand 2	C	209	216	anti-parallel
Strand 3	C	255	263	anti-parallel
Strand 4	C	244	249	anti-parallel
Strand 5	C	349	352	anti-parallel
Strand 6	C	371	374	anti-parallel
Strand 7	C	315	319	anti-parallel
Strand 8	C	405	409	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	312	first strand
Strand 2	C	377	378	anti-parallel
Strand 3	C	345	347	anti-parallel
Strand 4	C	338	340	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	17	first strand
Strand 2	D	41	44	anti-parallel
Strand 3	D	84	87	parallel
Strand 4	D	65	68	parallel

Back to list of sheets
Back to top of page

There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	97	first strand
Strand 2	D	102	106	anti-parallel
Strand 3	D	194	201	anti-parallel
Strand 4	D	158	164	anti-parallel
Strand 5	D	170	174	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	D	203	204	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	283	286	first strand
Strand 2	D	209	216	anti-parallel
Strand 3	D	289	291	anti-parallel
Strand 4	D	209	216	anti-parallel
Strand 5	D	405	409	first strand
Strand 6	D	315	319	anti-parallel
Strand 7	D	371	374	anti-parallel
Strand 8	D	349	352	anti-parallel
Strand 9	D	244	249	anti-parallel
Strand 10	D	255	263	anti-parallel
Strand 11	D	209	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	312	first strand
Strand 2	D	377	378	anti-parallel
Strand 3	D	345	347	anti-parallel
Strand 4	D	338	340	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2BVH

Analysis of interatomic Contacts of Structural Units in PDB entry:
2BVH