Analysis of interatomic Contacts of Structural Units in PDB entry:
2BW7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BW7 entry

There are 4 chains in PDB entry 2BW7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1002MET 1199
B
 MET 1004MET 1199
C
 MET 1004MET 1199
D
 ARG 1005MET 1199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2BW7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1020 1028Right-handed alpha
Helix 2
2
A
1029 1051Right-handed alpha
Helix 3
3
A
1074 1102Right-handed alpha
Helix 4
4
A
1142 1155Right-handed alpha
Helix 5
5
A
1164 1168Right-handed alpha
Helix 6
6
A
1171 1173Right-handed 310
Helix 7
7
B
1021 1023Right-handed 310
Helix 8
8
B
1024 1050Right-handed alpha
Helix 9
9
B
1074 1102Right-handed alpha
Helix 10
10
B
1142 1155Right-handed alpha
Helix 11
11
B
1164 1168Right-handed alpha
Helix 12
12
B
1171 1173Right-handed 310
Helix 13
13
C
1024 1050Right-handed alpha
Helix 14
14
C
1074 1104Right-handed alpha
Helix 15
15
C
1142 1155Right-handed alpha
Helix 16
16
C
1165 1170Right-handed 310
Helix 17
17
C
1171 1173Right-handed 310
Helix 18
18
D
1028 1050Right-handed alpha
Helix 19
19
D
1074 1099Right-handed alpha
Helix 20
20
D
1142 1155Right-handed alpha
Helix 21
21
D
1164 1168Right-handed alpha
Helix 22
22
D
1171 1173Right-handed 310
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There are 7 sheets in PDB entry 2BW7. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, DA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1054 1059first strand
Strand 2
A
1062 1067anti-parallel
Strand 3
A
1007 1018anti-parallel
Strand 4
A
1116 1131anti-parallel
Strand 5
A
1160 1163parallel
Strand 6
A
1190 1195anti-parallel
Strand 7
A
1175 1181anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1054 1059first strand
Strand 2
A
1062 1067anti-parallel
Strand 3
A
1007 1018anti-parallel
Strand 4
A
1116 1131anti-parallel
Strand 5
A
1136 1141anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1054 1059first strand
Strand 2
B
1062 1067anti-parallel
Strand 3
B
1007 1018anti-parallel
Strand 4
B
1116 1131anti-parallel
Strand 5
B
1160 1163parallel
Strand 6
B
1190 1195anti-parallel
Strand 7
B
1175 1181anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1054 1059first strand
Strand 2
B
1062 1067anti-parallel
Strand 3
B
1007 1018anti-parallel
Strand 4
B
1116 1131anti-parallel
Strand 5
B
1136 1141anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1054 1059first strand
Strand 2
C
1062 1067anti-parallel
Strand 3
C
1007 1018anti-parallel
Strand 4
C
1116 1131anti-parallel
Strand 5
C
1160 1163parallel
Strand 6
C
1190 1195anti-parallel
Strand 7
C
1175 1181anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1054 1059first strand
Strand 2
C
1062 1067anti-parallel
Strand 3
C
1007 1018anti-parallel
Strand 4
C
1116 1131anti-parallel
Strand 5
C
1136 1141anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1054 1059first strand
Strand 2
D
1062 1067anti-parallel
Strand 3
D
1007 1018anti-parallel
Strand 4
D
1116 1131anti-parallel
Strand 5
D
1136 1141anti-parallel
Strand 6
D
1116 1131anti-parallel
Strand 7
D
1175 1181first strand
Strand 8
D
1190 1195anti-parallel
Strand 9
D
1160 1163anti-parallel
Strand 10
D
1116 1131parallel
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