Analysis of interatomic Contacts of Structural Units in PDB entry:
2BZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BZL entry

There is 1 chain in PDB entry 2BZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 895SER 1184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 2BZL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
895 904Right-handed alpha
Helix 2
2
A
908 915Right-handed alpha
Helix 3
3
A
930 934Right-handed 310
Helix 4
4
A
945 948Right-handed 310
Helix 5
5
A
989 1000Right-handed alpha
Helix 6
6
A
1085 1104Right-handed alpha
Helix 7
7
A
1105 1108Right-handed 310
Helix 8
8
A
1125 1143Right-handed alpha
Helix 9
9
A
1148 1158Right-handed alpha
Helix 10
10
A
1166 1184Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2BZL. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
965 972first strand
Strand 2
A
975 982anti-parallel
Strand 3
A
1117 1120parallel
Strand 4
A
1004 1007parallel
Strand 5
A
1066 1074parallel
Strand 6
A
1051 1060anti-parallel
Strand 7
A
1038 1047anti-parallel
Strand 8
A
1032 1035anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1012 1013first strand
Strand 2
A
1016 1017anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il