Analysis of interatomic Contacts of Structural Units in PDB entry:
2C0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C0G entry

There are 2 chains in PDB entry 2C0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1024ALA 1251
B
 CYS 1024VAL 1244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 2C0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1034 1040Right-handed alpha
Helix 2
2
A
1056 1073Right-handed alpha
Helix 3
3
A
1091 1098Right-handed alpha
Helix 4
4
A
1128 1140Right-handed alpha
Helix 5
5
A
1150 1158Right-handed alpha
Helix 6
6
A
1159 1163Right-handed 310
Helix 7
7
A
1164 1182Right-handed alpha
Helix 8
8
A
1184 1205Right-handed alpha
Helix 9
9
A
1206 1221Right-handed alpha
Helix 10
10
A
1225 1242Right-handed alpha
Helix 11
11
B
1034 1040Right-handed alpha
Helix 12
12
B
1056 1073Right-handed alpha
Helix 13
13
B
1091 1099Right-handed alpha
Helix 14
14
B
1128 1140Right-handed alpha
Helix 15
15
B
1150 1155Right-handed alpha
Helix 16
16
B
1165 1180Right-handed alpha
Helix 17
17
B
1184 1205Right-handed alpha
Helix 18
18
B
1206 1221Right-handed alpha
Helix 19
19
B
1225 1241Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2C0G. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1029first strand
Strand 2
A
1076 1083parallel
Strand 3
A
1044 1051parallel
Strand 4
A
1107 1111anti-parallel
Strand 5
A
1118 1120anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1028 1029first strand
Strand 2
B
1076 1083parallel
Strand 3
B
1044 1051parallel
Strand 4
B
1107 1111anti-parallel
Strand 5
B
1118 1120anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il