Analysis of interatomic Contacts of Structural Units in PDB entry:
2C0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C0H entry

There is 1 chain in PDB entry 2C0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 15LEU 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2C0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 71Right-handed alpha
Helix 2
2
A
102 117Right-handed alpha
Helix 3
3
A
134 144Right-handed alpha
Helix 4
4
A
144 155Right-handed alpha
Helix 5
5
A
155 164Right-handed alpha
Helix 6
6
A
178 181Right-handed 310
Helix 7
7
A
190 194Right-handed 310
Helix 8
8
A
195 199Right-handed 310
Helix 9
9
A
211 230Right-handed alpha
Helix 10
10
A
241 244Right-handed 310
Helix 11
11
A
256 265Right-handed alpha
Helix 12
12
A
294 299Right-handed 310
Helix 13
13
A
310 314Right-handed 310
Helix 14
14
A
318 329Right-handed alpha
Helix 15
15
A
343 354Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2C0H. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
25 28anti-parallel
Strand 3
A
31 33anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
333 336parallel
Strand 3
A
304 308parallel
Strand 4
A
274 277parallel
Strand 5
A
235 239parallel
Strand 6
A
169 176parallel
Strand 7
A
120 127parallel
Strand 8
A
75 82parallel
Strand 9
A
35 39parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
96 98anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il